Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3425 ATGGCTCACCGTCAACTCATGGACTCGCTCACCTCTCACATTTCCCTCTACCATTCCCAATCCCCAAACCCTAACCCTAACCCTAACCCTAACCCTAACCCCAGAACCTCCATCCTCAAATGGTTCTCCTCTCTCTCCCTTCACCAGCGTCTCGCTCATCTCACCATTGTCGATTCCAGCTTCGTTCAGATCCTGCTTCAGATGATCGCCAATCTTCGCGGTAACGGCCATGGCTGCTTCATCCTCCTCCCCGATCTTCCCTCCCGCGACCCGCCTTTCCTCCCGACGCTCTGCTTCAAGAAATCGCGCGGTCTGCTGTCTCGTGTGGCCGATTCTGATGCTGCTGCCAGGTGGATCTTTGAGTCCGCCCGGTTGTTTGAGTCGCGGGAAGGGGAGGAGGTTGCCGCGTGCTTGTGCTCCCCGAGGCGGCTGGATGCGGTGGCGCTCGCGGAGGATCTTGTGGAGGATGTGGATAGGTTTGTGGAGGCGATGGATCGGATTTCCAATGGTGGGTTTCTCAGAGGGGAGGAGGGGGAGCTTGGCGCGGATTGGGTGGAGCTGAATTGGCTTAAATCGAAGGGATATTATGGGGTTGAGGCTTTTCTTGCTAACAGGATTGAGGTTTGTATGAGGCTGGCTTGGTTGAATAGCTCTGGTGGGAGGAAGAGGGGTGTGAAATTGAAGGAGAAGTTGAATGCAGCGGGAATTTCTGCCAATGTGTATTGGAGGAAGAAGGGCTGCGTGGACTGGTGGGCGAATCTGGATGCTGTGACGAGGAAGAAGGTCTTCACCACCATCATCATGAAAGCCGCAAAATCTTTGACGTCTGAGGTTCTGGAAGTGGCAGGCAGTGCCTCTAAGGATGAGATTTGGCTACATAGCACGGGAGCGGAGAAGTTACTTGACTATTATCGTCCTGCATCAGCTCAAAGGACCATCCCAACATTTCCTGATGATACAGAATTGGGAACAGTTATTACACCAGTCACATTTTGTACTAAACCTGCTGCTATAGCCAGAGCCTTTAATTCTTTGTTTGTGCTTCTTGATGTTAAAATGATGTTAACATCAACATCAAGTCATAATAGTGAATACGATATAGGAAAGCTTTTCTTTAGTTCGCTGGGCTCTGTTTGTACCATATCTGATTGTATATTAAGAAAAATGCGAGGGTTTCTGATGGTTATTTCACTTGACTGCACAAAACTCGAGCTATTAGAGGAGGTTCTTGACAAGTCTTCATCAAGTAAATCTAAAGAAAAGCTTAGTGTTTCTAACCGTAGAAAGAAGGGACGAACTCGCAACACTAAAAGGCAAAATCCTGTCCCAAAGACATCTTTGGGTGATATTTCACGTGAAAATCCACTTAAGGATATTGATTGTACAATGGACAATAAAATGAAGTCTGATTTAATGGGGTCAAGAGAACTTCCTGATGTTTCTCTGGGGAAGGAGATTTCTATGGGGAACTCATCATCAACTGTTAAAATGGATGGTACTCGGGAATTGGATTTTGGCAAACCTCGAACCACTCCAAGAAGAAGTAGAAAAGAGAAAAATAAAAATAAAAGCACCGCCGTTGACTGTACAGTTGGAGATTCTAAAAAGTCAATTATGCATGCTACCTCTAGCACTATTATTGCTGAAGGTGAGGTGGCTATACGTGGCAGGTCTTTTGATAGTTGTACCATTCCGAATGTAAAAAATGACAATTCAATTGGTAATGACATCCTTGCCTCAAATTCAAGCGTTTGTAGTTCTGTTAGTGGGCTTGCTAGGGAGAACAATTCAACCAGTGGAGTTGAAGGAGAGAATAATGAAAATCTCTCTGAAAGTTGCAATAGTTCAGGTCCTCAGTGTTGTTCATTGTCTAATGAAAGGAAAAAAAATTCTTCTGGATTAGATACTTTGACTTGTGATGTAGATTGTAAAGCTGGAACTCCACCTGTACGTGCACTGAATCATGATAGTTTCTTCAACAATGAAGACACCCATCCTTTGGACACAAGATGTGCCGTAAAAGCTGATTTAAAGTCCTCTATTCAGGACAAACCAATTAGAGAGGTTAATGTAAAAGAATTTGGGATGTTGAAGGAGCAAGATGGATGTCTATTTGAAAGTAGAACTGCATTCTCAAAATGCAGTCCATATGAGTGGCCGTGTGTACCTTCTATCTATTTTCCATCTTTGAACTCACATCTCCCTCCAGCCACAGATAGATTGCATCTGGATGTTGGGCGCAATTGGCACAACCACTTCTGCCACCCATTTGTTCCCACATTACAGCAGCCAAGAAATACACCAATTAAAGGTGGATGCAATCAGATCCTATCTCGTCCATTTCCTATGAGTTTTGACTGGCCTCCAGTTTTTCGTGGTGGTGTGAACCCATCACCCAATTGTAATTATGACTCCGGTTTTGTGTCTAGGCGACAATGTACCTTTTCGAAAGGGTTGGCTGTTCAGAGCATGCAGGTTGATGCAACAACTACTGATGATGAAAGAAAGTATCCTGGGGATATATTGGATTCACCTGATTTAACAAATGCACAGGAGCTAGCAGATGAGTTTGACAATCACTGGGTCTCGGAGGAAGAGTATGATTTTCACACTGTTTCTGGCATTGATTACAATCAATATTTTGGTGGTGGTATTATGTACTGGGACACTTCTGATCATCCAGGAAAAGGTTTCTCCCGGCCTCCATCTCTAAGCTCTGATGACAGTTTATGGGCTTTGCGTGAAGCTGATATGAATAGGACAGTGGATGATATGGTTGCTTTCCCATCTTCATATAGTACAAATGGTTTAACATCTCCGACTGCTGCGACATTTTGTTCTCCTTTTGATCCTGCAGGGACTGGGTCCCAGACTGTAGGTTATGTGGTGTCAGGTAATGAAGTACCTGGAAATGTGTTGCATTCTTCACCAGTTTCAGATGCAGTAGTGGATGAAGATACTTCTGGATCTTTGAGTAATAACTTAACTGGAGATATTGAAGGGAAGACAGGTGATGCACATCCATATCCACTTCTGCGGCCAATAATTATTCCTAACTTTTCAAGGGAAAGGTCAAGATGTGCTGATCATAAAAGCCCTTGTGTTCCACCTAACAGACGGGAGCAGCCTCGCATAAAGCGGCCACCATCACCTGTAGTGCTTTGTGTACCGCGTGCACCACGTCCACCTCCACCCTCCCCCGTGAGTGGCTCTAGAAAACAAAGGGGTTTTCCAACTGTTAGATCTGGTAGTTCCAGCCCAAGGCACTGGGGAATGAGAGGCTGGTATCATGATGGAAGTAATTTGGAGGAAGCTTGTTTAAGAATGGATGGTGCTGAAGTTGTGTGGCCTTCTTGGAGAAGTAATAATCTTGCGGTACAGCCTTTGATTCAACCTTTACCTGCAGCCTTGCTGCAAGATCGCCTGATTGCAATATCACAGATAACACGTGATCAGGAACATCCAGATGTCACCTTTCCTCTGCAACCTCCAGAGCTACAAAGCTGTTCTGCAACGAGTGCATCTTTATCATTGATGCATGGAATGCTCCATGATGAGATAGACTCTTTCTGTAAACAGGTTGCTGCAGAAAATATGGCAAGGAGGCCTTACATTAATTGGGCTGTCAAGAGGGTTACCCGATCTCTGCAGGTTTTATGGCCCAGATCCAGGACAAACATATTTGGTTCAAATGCAACTGGTATGTCCCTTCCAACAAGTGATGTTGACCTTGTGGTTTGCCTCCCTCCAGTGCGGAACCTGGAACCTATTAAAGAAGCTGGAATATTGGAAGGTCGTAATGGAATTAAAGAAACTTGTCTTCAGCATGCAGCTAGGTATCTTGCCAATCAGGACTGGGTAAAAACTGATTCTTTGAAGACAGTGGAAAATACAGCTATACCTATTATTATGCTTGTCGTGGAAGTACCCCTGGAAGTTATTACATCGTCAGCTCCTGTGATACATTCATTAAAAGAAGAGCCACATTGTACTCCTGGTGAACATGTTAATGACAGTCATTCTGATTCCATCCACTTAGAAGGTTCAGCTTTGCCAAAAAGCTCCGAAATAAATTTTTATGCGTTGAAAGAGTCCAAATCAGTTCGTGTTGACATTAGCTTTAAGTCCCCATCACATACAGGACTCCAAACTACAGAGATGGTCAAGGTGTTGACGGAACAATTTCCTGCTGCTACTCCTCTTGCTTTGGTACTAAAACAGTTTCTGGCAGATCGGAGCCTTGATCAATCCTACTCTGGTGGATTAAGTTCCTATTGCTTGGTCTTACTAATTATACGTTTTCTTCAGCATGAGCACCATCTTGGCCGGCCAATCAACCAAAATTATGGGAGCCTTCTTATGGATTTTCTCTACTTTTTTGGGAATGTGTTTGATCCTCGCCAAATGCGAATATCAGTCCAGGGAAGTGGACTTTATATAAAAAGAGAAAGAGGTTGTAGCATTGATCCAATTCACATCGATGATCCCCTTTTTCCAACTAATAATGTTGGAAGAAATTGCTTCCGAATACATCAATGTATTAAGGCATTTTCAGAGGCTTATGCTTTTCTCGAAAATGAACTCACGTTCCTAAGTGGTGATGGTGAGTCATCTTCAAGGCCATCTTACAGACTGCTTCCGAAAATCATCCCAAGTCTTGATATATTATAA 4671 0.4406 MAHRQLMDSLTSHISLYHSQSPNPNPNPNPNPNPRTSILKWFSSLSLHQRLAHLTIVDSSFVQILLQMIANLRGNGHGCFILLPDLPSRDPPFLPTLCFKKSRGLLSRVADSDAAARWIFESARLFESREGEEVAACLCSPRRLDAVALAEDLVEDVDRFVEAMDRISNGGFLRGEEGELGADWVELNWLKSKGYYGVEAFLANRIEVCMRLAWLNSSGGRKRGVKLKEKLNAAGISANVYWRKKGCVDWWANLDAVTRKKVFTTIIMKAAKSLTSEVLEVAGSASKDEIWLHSTGAEKLLDYYRPASAQRTIPTFPDDTELGTVITPVTFCTKPAAIARAFNSLFVLLDVKMMLTSTSSHNSEYDIGKLFFSSLGSVCTISDCILRKMRGFLMVISLDCTKLELLEEVLDKSSSSKSKEKLSVSNRRKKGRTRNTKRQNPVPKTSLGDISRENPLKDIDCTMDNKMKSDLMGSRELPDVSLGKEISMGNSSSTVKMDGTRELDFGKPRTTPRRSRKEKNKNKSTAVDCTVGDSKKSIMHATSSTIIAEGEVAIRGRSFDSCTIPNVKNDNSIGNDILASNSSVCSSVSGLARENNSTSGVEGENNENLSESCNSSGPQCCSLSNERKKNSSGLDTLTCDVDCKAGTPPVRALNHDSFFNNEDTHPLDTRCAVKADLKSSIQDKPIREVNVKEFGMLKEQDGCLFESRTAFSKCSPYEWPCVPSIYFPSLNSHLPPATDRLHLDVGRNWHNHFCHPFVPTLQQPRNTPIKGGCNQILSRPFPMSFDWPPVFRGGVNPSPNCNYDSGFVSRRQCTFSKGLAVQSMQVDATTTDDERKYPGDILDSPDLTNAQELADEFDNHWVSEEEYDFHTVSGIDYNQYFGGGIMYWDTSDHPGKGFSRPPSLSSDDSLWALREADMNRTVDDMVAFPSSYSTNGLTSPTAATFCSPFDPAGTGSQTVGYVVSGNEVPGNVLHSSPVSDAVVDEDTSGSLSNNLTGDIEGKTGDAHPYPLLRPIIIPNFSRERSRCADHKSPCVPPNRREQPRIKRPPSPVVLCVPRAPRPPPPSPVSGSRKQRGFPTVRSGSSSPRHWGMRGWYHDGSNLEEACLRMDGAEVVWPSWRSNNLAVQPLIQPLPAALLQDRLIAISQITRDQEHPDVTFPLQPPELQSCSATSASLSLMHGMLHDEIDSFCKQVAAENMARRPYINWAVKRVTRSLQVLWPRSRTNIFGSNATGMSLPTSDVDLVVCLPPVRNLEPIKEAGILEGRNGIKETCLQHAARYLANQDWVKTDSLKTVENTAIPIIMLVVEVPLEVITSSAPVIHSLKEEPHCTPGEHVNDSHSDSIHLEGSALPKSSEINFYALKESKSVRVDISFKSPSHTGLQTTEMVKVLTEQFPAATPLALVLKQFLADRSLDQSYSGGLSSYCLVLLIIRFLQHEHHLGRPINQNYGSLLMDFLYFFGNVFDPRQMRISVQGSGLYIKRERGCSIDPIHIDDPLFPTNNVGRNCFRIHQCIKAFSEAYAFLENELTFLSGDGESSSRPSYRLLPKIIPSLDIL* 1557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3425 1556 MobiDBLite consensus disorder prediction 982 1006 - -
Lja3g3425 1556 MobiDBLite consensus disorder prediction 416 527 - -
Lja3g3425 1556 PANTHER POLY(A) RNA POLYMERASE 671 1552 IPR045862 GO:0004652|GO:0031499|GO:0043631
Lja3g3425 1556 MobiDBLite consensus disorder prediction 1053 1069 - -
Lja3g3425 1556 MobiDBLite consensus disorder prediction 423 437 - -
Lja3g3425 1556 MobiDBLite consensus disorder prediction 1027 1046 - -
Lja3g3425 1556 Gene3D Beta Polymerase, domain 2 1196 1306 IPR043519 -
Lja3g3425 1556 MobiDBLite consensus disorder prediction 451 473 - -
Lja3g3425 1556 SUPERFAMILY Nucleotidyltransferase 1185 1390 IPR043519 -
Lja3g3425 1556 SUPERFAMILY PAP/OAS1 substrate-binding domain 1396 1529 - -
Lja3g3425 1556 MobiDBLite consensus disorder prediction 1027 1085 - -
Lja3g3425 1556 Gene3D - 1180 1195 - -
Lja3g3425 1556 Gene3D - 1358 1550 - -
Lja3g3425 1556 Pfam Nucleotidyltransferase domain 1210 1253 IPR002934 GO:0016779
Lja3g3425 1556 PANTHER NUCLEOTIDYLTRANSFERASE FAMILY PROTEIN 671 1552 - -
Lja3g3425 1556 MobiDBLite consensus disorder prediction 982 999 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3425 - - mtr:MTR_4g027425 2337.38