Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3415 ATGGCTTCTTCTTCTTCATCTTCTTCTCTGACAATATCTCCAAGAAAACTGCGCTATGATTTGTACTCCTACTCATACCAAGAAGATTCCAACACCCCATTAGTGATAAACGTTCTCTCTTCACTGATTGAGAGAAACATGGCCAGAACAAAGAGAATTGTGAAGAACTGTTCTCGTTCTCTATCCAAAGCAATCAGCGCAAACATCTTCGATTGCAGAGAGATCCCTGACATGACCATCCAATCCTATCTCGAGAGAATTTTCAGGTACACTCGTGCAGGACCCTCTGTGTATGTGGTTGCCTATGTCTACATCGATCGGTTTTGTCAGAACAATCCTGGGTTTCGAATCAATGCCAGAAACGTTCATAGACTTCTCATAACAACGATAATGGTGGCTTCTAAGTATGTAGAAGACATGAATTACAGAAATTCATACTTTGCAAGAGTTGGTGGTTTGGCAACAAATGAATTGAACGCGTTGGAGCTTGAATTTTTGTTCATGATGGGTTTCAAATTGCATGTGAATGTGAGTGTGTTTGAGAGCTATTGCTGCCATTTGGAGAGGGAAGTTAGCATTGGAGGAGGGTATCATATTGAGAGAACCCTAAGGTGTGCTGAAGAAATCAAAACAAGGCAAATTGAGGAAAGGGGATACACACAAATCGCACGTGTAATGTTGTAG 684 0.4123 MASSSSSSSLTISPRKLRYDLYSYSYQEDSNTPLVINVLSSLIERNMARTKRIVKNCSRSLSKAISANIFDCREIPDMTIQSYLERIFRYTRAGPSVYVVAYVYIDRFCQNNPGFRINARNVHRLLITTIMVASKYVEDMNYRNSYFARVGGLATNELNALELEFLFMMGFKLHVNVSVFESYCCHLEREVSIGGGYHIERTLRCAEEIKTRQIEERGYTQIARVML* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3415 227 PANTHER CYCLIN-U2-1 9 226 - -
Lja3g3415 227 PANTHER UNCHARACTERIZED 9 226 IPR013922 GO:0000079|GO:0019901
Lja3g3415 227 PIRSF PREG 9 224 IPR012389 -
Lja3g3415 227 Gene3D - 23 224 - -
Lja3g3415 227 SUPERFAMILY Cyclin-like 82 174 IPR036915 -
Lja3g3415 227 Pfam Cyclin 62 173 IPR013922 GO:0000079|GO:0019901
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3415 Lja-Chr3 67435151 67436550 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3415 - - lja:Lj0g3v0114179.1 432.565