Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3414 ATGGCTTTAGGTGGAGGAAACCCCCAAAGAGGAAGTGCTGCAGCTACTGCAAGCATGAGGAGAAGGAAACCAGCTGGTGGTGCGGCCGCGGGAGGAGCAGCCGGGAACATGCTTCAATTTTACACTGATGATGCCCCTGGACTCAAGATCTCCCCAAATGTGGTTCTTGTAATGAGCATTGGCTTTATAGCATTTGTTGCCATTCTTCATGTGATGGGCAAGCTATATTTTGTGCGTAGGGAGGCATAG 249 0.502 MALGGGNPQRGSAAATASMRRRKPAGGAAAGGAAGNMLQFYTDDAPGLKISPNVVLVMSIGFIAFVAILHVMGKLYFVRREA* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3414 82 MobiDBLite consensus disorder prediction 1 32 - -
Lja3g3414 82 PIRSF Sec61_beta 2 80 IPR030671 GO:0005784|GO:0006886
Lja3g3414 82 PANTHER SEC61 SUBUNIT BETA 1 82 IPR030671 GO:0005784|GO:0006886
Lja3g3414 82 Pfam Sec61beta family 34 73 IPR016482 -
Lja3g3414 82 PANTHER PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT BETA 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3414 Lja-Chr3 67419615 67421102 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3414 K09481 - csv:101220008 135.961