Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3396 ATGGAAGAAAGTGTCACAATGAGGGATCCACTGCCACAAATCCCATCTTCTCTAATCATCACTTATCTTTACATTGGTCACTTCTTAACTAGATGGGGCAACAGAATGTGGGAATTCTCTGTTGGTTTATATATGATCCATATCTGGCCAGACTCATTGCTCTATGCAGCAATATATGGTGCTGTTGAATCTGCCTCCACCGCAGTGTTTGGTCCTATAATTGGAACATGGGTTGATAAGTTAACGTATGTGAAGGTTTTGAAACTGTGGTTGGTGATACAGAATCTCTCTTTCATTATTGCCGGGGCCACTGTGTTTACCTTACTTGTCTACTCATCTTTGAAGTTTACTTGTTTCTCAGCTTTCATATTGCTGGTTTCTATAACCAATGTCTGTGGTGGCATTGGGGTGCTTTCAAATCTTGCCGGTACCATCTTGATTGAAAGAGAATGGTTGTTAGTTATATCCGAAGGTCAACCCCCGGAATTGCTGACAAAGATGAATTCAGTTACCAGACGCATTGATCTGAGCTGCAAACTTCTTGCTCCTGTTATAACTGGGTTTATAATAAGCTTTGTATCCCTAGAAGCATCTGCTATAACTCTAGCACTCTGGAATACTGTCTCTGTTTGGGTAGAGTATTGGCTTTTTATCTCGGTGTATAAGGGGATTCCAGCTTTGGGCCAAAGTAGCCTGAGGAGGATGACAAGATTTCCACGAAGGGATCTAGAAATGAAGAATTCAACTTCAGAGGGAGATAGCTTGCTTTCTGTTACTGATAGTAACACTGAATTGGCAGATAGAGAAAGCTGGAACAAAATTTCTGAGTGGATTTCAAGGATCCCTTATATTGATGCATGGAGAGTTTATTTACAGCAACAAGTTGTGCTACCTGGACTAGCTCTGGCTTTGCTATATTTCACTGTACTCAGCTTTGGAACTCTAATGACAGCCACATTAGAATGGAAAGGCATATCTGCATATGTTATTGGAATGGCACGAGGAATAAGTGCTGTAGTTGGAATCGCTGCAACAGTTCTATATCCTTTGCTGCAGTCTCGCATACCGACAATTAGAACTGGACTTTGGTCGATCGGGTCTCAGTGGGCTTGCCTTCTCCCCTGTGTAGCTGCAATAGGGATAAAAAATGGCCTTCTATCATCTTATATTTTGATGGGAAGTGTATCTATATCTCGGCTTGGACTGTGGATGTTTGACTTGTCTGTACTTCAACAAATGCAGAACCTTGTGCCAGAATCTGATCGTTTGATTGTTGGAGGTGTTCAGAATTCTCTGCAGTCCTTGATGGATTTATTGGCCTATGTTATGGGAATCATAATATCTGATCCACGGGACTTTTGGAAGTTGATTCTGTTATCGTTTCTGGCAGTCACATTAGCTGCATTCCTTTACTGCATTCATGTATACCGCGCGGGGAGGCTTATCTTTCACTTTGACAGACTTCTTAAGGGAGCAAATGTGGAAGAATATTCAAGTTCAAATTACAATCCATCGGAAGAAGAGGACATACCAAGAAATACTTGTAACAATGACGAGAATCCAGCTTAA 1569 0.4136 MEESVTMRDPLPQIPSSLIITYLYIGHFLTRWGNRMWEFSVGLYMIHIWPDSLLYAAIYGAVESASTAVFGPIIGTWVDKLTYVKVLKLWLVIQNLSFIIAGATVFTLLVYSSLKFTCFSAFILLVSITNVCGGIGVLSNLAGTILIEREWLLVISEGQPPELLTKMNSVTRRIDLSCKLLAPVITGFIISFVSLEASAITLALWNTVSVWVEYWLFISVYKGIPALGQSSLRRMTRFPRRDLEMKNSTSEGDSLLSVTDSNTELADRESWNKISEWISRIPYIDAWRVYLQQQVVLPGLALALLYFTVLSFGTLMTATLEWKGISAYVIGMARGISAVVGIAATVLYPLLQSRIPTIRTGLWSIGSQWACLLPCVAAIGIKNGLLSSYILMGSVSISRLGLWMFDLSVLQQMQNLVPESDRLIVGGVQNSLQSLMDLLAYVMGIIISDPRDFWKLILLSFLAVTLAAFLYCIHVYRAGRLIFHFDRLLKGANVEEYSSSNYNPSEEEDIPRNTCNNDENPA* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3396 522 MobiDBLite consensus disorder prediction 500 522 - -
Lja3g3396 522 Pfam Ferroportin1 (FPN1) 20 464 IPR009716 GO:0005381|GO:0016021|GO:0034755
Lja3g3396 522 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 1 7 488 - -
Lja3g3396 522 SUPERFAMILY MFS general substrate transporter 19 477 IPR036259 -
Lja3g3396 522 CDD MFS_SLC40A1_like 22 474 IPR009716 GO:0005381|GO:0016021|GO:0034755
Lja3g3396 522 Gene3D MFS general substrate transporter like domains 17 474 IPR036259 -
Lja3g3396 522 PANTHER SOLUTE CARRIER FAMILY 40 MEMBER 7 488 IPR009716 GO:0005381|GO:0016021|GO:0034755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3396 Lja-Chr3 66958516 66965273 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3396 8 488 Organic Solute Cotransporters AT2G38460 58.299 0.0 571
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3396 K14685 - gmx:100802561 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3396 3 66958516 66965273 Lja3g3396 3 66958516 66965273 ECH