Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3393 ATGAAGAAACAGAAGCAGAACCGTTCATCAGAAACACAACAACACTCGAATTCGAACCCATTCGAGTCTCTCTCCGAGGAACTCGTCTTCACCATCCTCGATTTCCTCGAAGCTGATTCTCAAGCCAGCAAATCGTTCTCGCAGTCATGTAAATGGTTCCACTCGCTGGAATCCAGGCACCGTCGCGTCCTCAGGCCACTACGCGCCGACCACTTGCCGGCGATGGCGGCGCGTTACCCTTCAGTGGAGGAGCTCGATCTCTCGCGGTGTCCGCGCGTGGGTGATGAATCACTGACTCTGGTGGCTGCTTCTTACCGGGAAACGCTCCGGCGGGTGGACCTGTCGCGGTCGAGATTCTTCACCGGGAATGGGCTGCTGAGCGTTGCTGTGAGCTGCCGGAACTTGGTGGAGCTTGACCTGTCCAACGCGACGGAGATAAGGGATGCTGCGGCGGCTGCGGTTGCTCGCGCCGGGAACCTCCGGAAGCTGTGGCTGAGCAGGTGCAAGCTGATTACGGATATGGGGATCGGGTGTATCGCAGTTGGGTGCAGGAAGTTGAGGCTGATTTGCTTGAAGTGGTGTGTGGGTGTTGGAGATTTGGGGGTTGATTTGCTTGCTATTAAGTGTAAGGAGCTGAGCAATTTGGATCTTTCTTATTTGCCTATCACGGAGAAATGTCTCTCATCGATCTTCAAGTTGCAACATCTTGAAGATTTGGTCCTTGAAGGATGCTTTGGCATTGATGATGACAGCCTCAATAATGTTGTCTTCAAACAAGGTTGCAAGACATTAAAGAAACTCGATATCTCTGGTTGTCAGAACATAAGTCACATTGGTCTGTCAAAGCTAACTAGCATTTCTGGATGTGTAGAACGACTCATTTTAGCAGATGGTTCTCCTGTGACTCTTGCTCTTGCTAATGGTTTGAGTAAACTTTCCATGTTGCAATCAATAATATTAGATGGCTGCCTTGTTACTTCTGATGGATTAAGGGCCATTGGAAATTTGCGCATTTCTCTCTGGGAGTTGAGTCTAAGCAAATGTTCAGGAGTGACAGATGAAGCCCTCTCATTCATTGTGTCTAAACACACAGATCTAAGGAAACTTGACATCACGTGTTGCCGTATGATAACAGATGTTTCCATCGCCAGCATTGCAAATTCATGCACAAGCCTCACTTCTCTCAAAATGGAGTCATGTACTCTAGTTCCACAGGAAGCATTTGTCCTGATTGGACAGAAATGCCATTATCTTGAGGAGCTTGACATAACAGATAATGAAGTTGATGATGAAGGTCTTAAGTCTATATCTAATTGTTCCAGGCTCTCCAGCCTGAAAGTAGGAATCTGCCTTAACATAACTGACAGAGGAGTGGCCTATATTGGCATGTGTTGCTCAAAGTTAAAGGAACTGGATCTATACAGGTCTACAGGAATTACAGATTTAGGCATTTCAGCAATTGCTTGTGGTTGCCCGGGCCTTGAAATAATTAATACATCTTATTGTACTAACATCACGGATGGGTCATTAATCTCCTTGTCAAAATGTCGAAATCTGAAGACACTCGAAATACGTGGATGTCTTCTCGTTACGTCTATAGGTCTGGCATCTATCGCGATGAATTGTAAACAACTAATCTGCGTAGACATAAAGAAGTGTTACAACATTGATGATAGTGGGATGATTCCCCTAGCATATTTCTCCAAAAGTCTAAGACAGATAAATTTGTCATATAGCTCAGTTACGGATGTGGGGCTTCTGTCACTTGCTAGTATCAGTTGCCTTCAAAGCTTTACCATCCTTCACCTTCAAGGCTTGGCTCCAGGAGGACTCGCTGCTGCCTTATTGGCATGTAGAGGGCTAACAAAAGTGAAGCTTCACCTTTCACTAAGATCTCTGTTACCTGAGCTGCTTATCAGACATGTAGAAGCACGCGGCTGTGTGTTTGAATGGAGAGATAAAGTGTTTCAGGCTGAATTGGACCCCAAGTGTTGGAAACTGCAGTTAGAGGATCTGATGCACTAG 2025 0.4612 MKKQKQNRSSETQQHSNSNPFESLSEELVFTILDFLEADSQASKSFSQSCKWFHSLESRHRRVLRPLRADHLPAMAARYPSVEELDLSRCPRVGDESLTLVAASYRETLRRVDLSRSRFFTGNGLLSVAVSCRNLVELDLSNATEIRDAAAAAVARAGNLRKLWLSRCKLITDMGIGCIAVGCRKLRLICLKWCVGVGDLGVDLLAIKCKELSNLDLSYLPITEKCLSSIFKLQHLEDLVLEGCFGIDDDSLNNVVFKQGCKTLKKLDISGCQNISHIGLSKLTSISGCVERLILADGSPVTLALANGLSKLSMLQSIILDGCLVTSDGLRAIGNLRISLWELSLSKCSGVTDEALSFIVSKHTDLRKLDITCCRMITDVSIASIANSCTSLTSLKMESCTLVPQEAFVLIGQKCHYLEELDITDNEVDDEGLKSISNCSRLSSLKVGICLNITDRGVAYIGMCCSKLKELDLYRSTGITDLGISAIACGCPGLEIINTSYCTNITDGSLISLSKCRNLKTLEIRGCLLVTSIGLASIAMNCKQLICVDIKKCYNIDDSGMIPLAYFSKSLRQINLSYSSVTDVGLLSLASISCLQSFTILHLQGLAPGGLAAALLACRGLTKVKLHLSLRSLLPELLIRHVEARGCVFEWRDKVFQAELDPKCWKLQLEDLMH* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3393 674 Gene3D Ribonuclease Inhibitor 408 655 IPR032675 -
Lja3g3393 674 Gene3D Ribonuclease Inhibitor 292 407 IPR032675 -
Lja3g3393 674 PANTHER F-BOX/LRR-REPEAT PROTEIN 3 13 617 - -
Lja3g3393 674 SMART LRR_CC_2 389 414 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 261 286 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 491 516 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 517 541 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 234 258 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 337 362 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 158 182 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 312 336 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 106 131 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 79 104 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 465 490 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 415 438 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 209 233 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 439 464 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 183 208 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 568 592 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 132 157 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 363 388 IPR006553 -
Lja3g3393 674 SMART LRR_CC_2 542 567 IPR006553 -
Lja3g3393 674 SUPERFAMILY RNI-like 71 284 - -
Lja3g3393 674 MobiDBLite consensus disorder prediction 1 21 - -
Lja3g3393 674 Gene3D Ribonuclease Inhibitor 4 290 IPR032675 -
Lja3g3393 674 Pfam Leucine Rich repeat 261 283 IPR001611 GO:0005515
Lja3g3393 674 Pfam Leucine Rich repeat 465 488 IPR001611 GO:0005515
Lja3g3393 674 Pfam Leucine Rich repeat 414 437 IPR001611 GO:0005515
Lja3g3393 674 Pfam Leucine Rich repeat 515 539 IPR001611 GO:0005515
Lja3g3393 674 Pfam Leucine Rich repeat 363 386 IPR001611 GO:0005515
Lja3g3393 674 SUPERFAMILY RNI-like 260 507 - -
Lja3g3393 674 PANTHER UNCHARACTERIZED 13 617 - -
Lja3g3393 674 SUPERFAMILY RNI-like 465 625 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3393 K10268 - gmx:100803617 1055.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3393 3 66891564 66895510 Lja3g3393 3 66891564 66895510 ECH