Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3390 ATGGCAGTTTCAAAGTCAGAAATAAAGGATATAGACATGCCCCCAGAAACTAGTGAAGGCGCAGTAGTGGTGCTCCTAAGGCAGTGGGAGAGGGAAGTTTTGCTCGAGAGAGGTTTGTTGTGGTTGAGAGTAATTGCTTTTGTTTCCTCTTTCATTTCCTTCATCACCATGGCAAGCAACAAGCATGGCGGTTGGAAAGATTTCGACAAGTATGAAGAATTCAGGCATTTGCTGGCCACAGCCATTATATCTAGTTTGTACACTGGTTACCAAGTTTTTCGTCAAGTTCAAGAACTTTACACTGAAATAAACCTACTTCGACCGAGATCTGCAGTGTTGATTACTTTTTCTTTTGTTGGAGATCAGGTTTTGCATTCCTTCTTCTCTCATTGCATTCATTTTCATGGTGCTCTGTTTCTAAGCCCAACCACCTCTATAGATAGCAAAGAATCAAATTTTGTCATGAAATTTAATTTAATGATAGCATCATCAGTGATCAGTTTTTGGTTTCAGGTTATGGCATATCTCATGATGTCATCAGTATCATCCGGGATTCCAATGACAAGTGGGATGAGGAGTGTAGAAGACAATATATTCACAGATTCTTTAGCTGCAGCCATTAGCATGTCCTTTTTTGCCTTTTTGTGTCTAGCACTATCAGCCCTTATATCAGGATATAAACTATCAACTCAAATTTATAGCTAA 705 0.3915 MAVSKSEIKDIDMPPETSEGAVVVLLRQWEREVLLERGLLWLRVIAFVSSFISFITMASNKHGGWKDFDKYEEFRHLLATAIISSLYTGYQVFRQVQELYTEINLLRPRSAVLITFSFVGDQVLHSFFSHCIHFHGALFLSPTTSIDSKESNFVMKFNLMIASSVISFWFQVMAYLMMSSVSSGIPMTSGMRSVEDNIFTDSLAAAISMSFFAFLCLALSALISGYKLSTQIYS* 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3390 234 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 17 124 - -
Lja3g3390 234 PANTHER NITRATE, FORMATE, IRON DEHYDROGENASE 166 233 - -
Lja3g3390 234 Pfam Casparian strip membrane protein domain 39 124 IPR006702 -
Lja3g3390 234 PANTHER CASP-LIKE PROTEIN 4B1 17 124 - -
Lja3g3390 234 PANTHER CASP-LIKE PROTEIN 4B1 166 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3390 Lja-Chr3 66848709 66850763 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3390 - - gmx:100818718 177.178