Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3386 ATGAACACCATGAACACCCACCATTTCCTCACCCCCTGTTTCTTCCTTCTCCTCTCTTTCCACGCCCTCACTTCCTCTGCCACCACCGCAGAACAAGAAGGCACTTCCGATTTCGTCCGACCAATAGACCGCAAGCTACTCGGCCTTCACAAGAAAGAAAAGCTGAGCCACTTCAAGTTCTACTGGCACGACATTTTGAGCGGAAGAAGCCCGACATCGGTTCCAATTGTTCCCCCAGCCTACAAAAACTCCACCACTTTCTTTGGTGCGATCTCCATGATCGATAACCCTTTGACACTTGGTCCTTCTCTGAGTTCCAAGCTTGTGGGGAGGGCTCAGGGGTTCTACGGCTCTGCATCGCAGAGCGAGCTCAGTGCTCTCATGGCCATGAATTTTGCTTTCATTGAAGGGAAGTATAATGGCAGCACCATCACCATCTTGGGGAGGAACCCTGTTTTCAACAAGGTCAGAGAGATGCCTGTGATTGGTGGAAGTGGACTTTTCAGATTTGCTAGGGGGTATGCTGAAGCTAGAACAAACTGGTTTGATTTGAAATCTGGGGATGCTGTTGTTGAGTACAATGTTTATGTTTTCCATTATTGA 603 0.4859 MNTMNTHHFLTPCFFLLLSFHALTSSATTAEQEGTSDFVRPIDRKLLGLHKKEKLSHFKFYWHDILSGRSPTSVPIVPPAYKNSTTFFGAISMIDNPLTLGPSLSSKLVGRAQGFYGSASQSELSALMAMNFAFIEGKYNGSTITILGRNPVFNKVREMPVIGGSGLFRFARGYAEARTNWFDLKSGDAVVEYNVYVFHY* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3386 200 PANTHER DIRIGENT PROTEIN 16 199 - -
Lja3g3386 200 PANTHER NUCLEOPORIN-RELATED 16 199 IPR004265 -
Lja3g3386 200 Pfam Dirigent-like protein 56 198 IPR004265 -
Lja3g3386 200 Gene3D - 45 194 IPR044859 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3386 Lja-Chr3 66743389 66744211 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3386 - - gmx:100808529 286.189