Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3379 ATGTCCTCCACCGCGCCACCCGTCCTCCCCGTCTCCAACACCCCTCCGGCATCCACCACCGTCGCATCTGCCGGATCCGACGCCCCTGCCACCTCCCCCGCCTTCCGCGCCCTCATCAACAACCTCTCCGAATCCCTCCGCAACGGCCTCTCTCAGCGCCGTCCCTGGTCGGAGCTTACCGATCGCTCCGCATTCTCCAAACCGGAATCCTTCTCCGATGCCACCCTCCGCGTCCGCAAGAATTTCTCCTACTTCCGCATCAACTACTACGCCGTCGTTTCGCTCATCCTCGCCGTGTCGCTCCTCACCAATCCGTTCTCGCTCATCACCTTGACCGGCCTTCTCGCTTCCTGGACATTCCTCTACCTCTTCCGCCCTGCGGATCGCCCTCTCGTTCTCTTCGGCCGCACCTTCACCGATTTCGAGACGCTCGCGATTCTCTCCGCACTGACGATCTTCGTCGTTTTCCTCACCAGTGTCGGTTCCGTCCTCGTCTCTGCTCTCATGCTCGGCGTCGCCTTTGTTTGCCTCCATGGCGCATTCCGCGTCCCTGAGGATCTCTTCCTTGATGAGCAGGAGCCCTCTCAGACCACCGGATTCCTCTCCTTCCTCCGCGCTCCTGCTGCCGTCGCCTCCGCCGCGGTTCCTTCCGTCACCGGTCGCGTTTGA 669 0.6248 MSSTAPPVLPVSNTPPASTTVASAGSDAPATSPAFRALINNLSESLRNGLSQRRPWSELTDRSAFSKPESFSDATLRVRKNFSYFRINYYAVVSLILAVSLLTNPFSLITLTGLLASWTFLYLFRPADRPLVLFGRTFTDFETLAILSALTIFVVFLTSVGSVLVSALMLGVAFVCLHGAFRVPEDLFLDEQEPSQTTGFLSFLRAPAAVASAAVPSVTGRV* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3379 222 MobiDBLite consensus disorder prediction 1 27 - -
Lja3g3379 222 MobiDBLite consensus disorder prediction 1 28 - -
Lja3g3379 222 PANTHER PRA1 FAMILY PROTEIN-RELATED 1 216 - -
Lja3g3379 222 PANTHER PRENYLATED RAB ACCEPTOR 1-RELATED 1 216 IPR004895 -
Lja3g3379 222 Pfam PRA1 family protein 50 192 IPR004895 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3379 Lja-Chr3 66562737 66564059 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3379 K20359 - gmx:100801690 335.88