Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3372 ATGCAGAGATGGAAATGGAGCAGAAAGAAACCTCCCATTTTTCCTCTGCTTGTTGTTTTCTTCATGGTCTTCATAGCATTCTCAACCTTCCACAGTGAACACAGCATTCAACAAATCCATGAAAACCCAGATCATGTTCACAATCACCAAGAAGCTTCCTATGTCAAACCCAACCTCTCTGGTCAACTCAAGCAAGCTCCAGAGGTTTTGGATAGATTCAGTAGATGCAACTCCACTGTGGAGTATAGTGGCCGGAAAATTGCTTGGTCTGGCGATTCTCAGCGTTCCGGTCACCGGAGAGCGAGTTCTGAGAGCTGTGATGTTTTCTCGGGCAAGTGGGTCTTTGATAATGCTTCATATCCATTGTACAGTGAGTCAGCTTGCCCTTACATGTCTGATCAATTGGCCTGTCACAAGCATGGAAGGTCTGATCTGGGGTACCAGCATTGGAGATGGCAGCCACATAACTGCAATTTGAAGAGGTGGGATGTGAAAGAAATGTGGGAGAAGTTGAGAGGTAAAAGGCTAATGTTTGTTGGGGATTCACTAAACAGAGGGCAATGGATATCTATGGTATGCTTGTTACAGTCAGTAATTCCTTCTGATAAGAGATCAATGTCACCAAATGCCCATCTTACCATCTTCAGAGCAGAGGAGTATAATGCAAGTGTGGAATTCCTCTGGGCTCCTCTTCTTGTTGAATCTAATTCCGATGATCCTGTAAATCACAGACTAGGTGAACGGATAATTCGTCCTGATTCTGTTCTTAAGCATGCATCACTGTGGGAGCATGCTGATATACTTGTTTTCAACACATACTTGTGGTGGAGACAAGGCCCAGTCAAGCTATTATGGACTAGTGAAGAAAATGGAGCTTGTGAAGAATTAAATGGACAAGGAGCCATGGAGTTGGCCATGGAAGCCTGGGCAGATTGGATATCTTCGAAAGTTGATCCCCTCAAGAAGCGTGTCTTTTTTGTGACCATGTCCCCAACACATCTCTGGAGCCGAGAGTGGAAGCCAGAAAGTGAGGGAAACTGTTATGATGAAAAGGACCCCATTAATTTTGAGGGCTATTGGGGAAGTGGTTCTGATTTGCCTACAATGAGAAGCGTGGAGAAGATCCTAAGCAGTTTAAAATCAAAAGTTTCGGTTCTCAACATTACTCAAATGTCAGAGTATAGGAAGGATGGTCATCCTTCCATTTTTCGCAAATTTTGGGAGCCTCTTCGCCCCGAACAATTGTCAAATCCTCCTTCTTACTCTGATTGCATACATTGGTGCTTGCCAGGGGTACCTGATGTGTGGAATGAGCTACTATTCCACTTATTATAG 1335 0.4412 MQRWKWSRKKPPIFPLLVVFFMVFIAFSTFHSEHSIQQIHENPDHVHNHQEASYVKPNLSGQLKQAPEVLDRFSRCNSTVEYSGRKIAWSGDSQRSGHRRASSESCDVFSGKWVFDNASYPLYSESACPYMSDQLACHKHGRSDLGYQHWRWQPHNCNLKRWDVKEMWEKLRGKRLMFVGDSLNRGQWISMVCLLQSVIPSDKRSMSPNAHLTIFRAEEYNASVEFLWAPLLVESNSDDPVNHRLGERIIRPDSVLKHASLWEHADILVFNTYLWWRQGPVKLLWTSEENGACEELNGQGAMELAMEAWADWISSKVDPLKKRVFFVTMSPTHLWSREWKPESEGNCYDEKDPINFEGYWGSGSDLPTMRSVEKILSSLKSKVSVLNITQMSEYRKDGHPSIFRKFWEPLRPEQLSNPPSYSDCIHWCLPGVPDVWNELLFHLL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3372 444 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 4 444 IPR029962 GO:0016413
Lja3g3372 444 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 161 442 IPR026057 GO:0016740
Lja3g3372 444 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 35 4 444 - -
Lja3g3372 444 Pfam PMR5 N terminal Domain 105 158 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3372 Lja-Chr3 66439030 66446488 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3372 - - gmx:100789158 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3372 3 66439030 66446488 Lja3g3372 3 66439030 66446488 ECH