Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3362 ATGGCTTCCATCAACTTCAACCCATTCGGAGGGAACTGGAACTGGTTCTCAAAACCCTCAAACCCTCTTCCTCCTCTCAACACCCTCCTCACCTTCTCCGACAACCACCACCACTCCCCCAACTTCGCCGCCATCAACCTCTTCCGTCGAAACCCCAAGAAAAAACCCGACAACGACAACGAACCCGGTCCCTACACCCGCATGGCGCACCAATTCTTCTGGGAATGCGAGAATCTCCCCGACCACCGGCACACTCCAGAGGTCGAGAAGATTCTCAACGACGACCCCGTTTTCGAGAAGAAGGAGAATCCTACAGAGGAGGAAATCAAGGAGAACATGGAGATGTTGGAGAAGATTAAGAGCAGCCCCGTGATGCAGTTTTTGGTTAGAGCGGAAGAGATTGCGGATAAGATGAATGAGATGGAGCTGAAGGAGAATGAGAACCCGTATCATAAGGAGGATAGGGAGCTTTGGAAGGCGTTGCCGAATGTTATCGGGCTCGACGGGAGGCCGATGCCCCGGAAGGCGTTGAAGACTAGGCAGGAGGCTCATGATAAGTTTTGGGATTTTGCAAGGCAGTTCTTTTTTGGGCTTTGGGGGTTTAGGCAGAGGCCTTACCCTCCTTGTAAGCCTAATGATGCTGCTCAGGCTATTGGGTATAAGAACCTTGAGAAGCGGTACTATGATTTTATCATGAGGAGTGGTGGATTTTACTATAAGGATCGTCTGGGTCGAACACGAGGACCGTGTGAGTTGATTCAACTTAAAACTGCATGGGGTGCTGGGATTATTGATAAGAATACTTTCATTTGGGGTGAGGATATGGATGAATGGGCACCCATTCACATGATTTACGGAATGGAGCGTGCAGTTGCTACCTGGGAAGTTCGATTTGCTGCTTCAGCAACAGCTTTCCTTCACAAACTACAAAGAGGTATACCACCCTGGGTTCCTCTTAAGGGTTTTGAGGAGAAGACATATGAGCAGCTTCAAGAAGAGGCCATAGAAAGCAAGAGACGTGATTTAGCAGTATTGGAAGCTAATGATGGTGTTTGGCCTGGAGTTAGAATTCCAAGTCATGCGCTATTTCTTTGGGCTAGCGGCTCTGAACTGACCACTATTTTGGAACAGGATCACATGCCCAACAAATACATTCCCAAAGATATGAGACGGAAGCTGGCTGACCTTATTCCAGGGTTGAGGCCGTGGGAAGTTCTGAGCATAGAACAAGCAATGGATCGAATAACATTTAATGGTGAATGGTACCGTGAACCACTTGGGTCATTCAGCACCGGGCCACCATACATCAGGCACTGGAATAATGACGTTATGAGGACGTTTAAGCTATTTGAAGACCTAAACAATGAGTTGTATGAAAAAATGGAGAAGACACTTCCTGGCTTTGACAAAATTGTGAACAAGATCCAGCATGATTTTTATACCAGAATTGAGAAACTTACGGAGAAGAAAAATGCAGAGAAAAGAGAGGCCCGCAAGAAAGCTGGGTTGCCCGAGTACGAATGGCACGAAAAATCCCCTTATGAAAAATCCCCTTAG 1557 0.4733 MASINFNPFGGNWNWFSKPSNPLPPLNTLLTFSDNHHHSPNFAAINLFRRNPKKKPDNDNEPGPYTRMAHQFFWECENLPDHRHTPEVEKILNDDPVFEKKENPTEEEIKENMEMLEKIKSSPVMQFLVRAEEIADKMNEMELKENENPYHKEDRELWKALPNVIGLDGRPMPRKALKTRQEAHDKFWDFARQFFFGLWGFRQRPYPPCKPNDAAQAIGYKNLEKRYYDFIMRSGGFYYKDRLGRTRGPCELIQLKTAWGAGIIDKNTFIWGEDMDEWAPIHMIYGMERAVATWEVRFAASATAFLHKLQRGIPPWVPLKGFEEKTYEQLQEEAIESKRRDLAVLEANDGVWPGVRIPSHALFLWASGSELTTILEQDHMPNKYIPKDMRRKLADLIPGLRPWEVLSIEQAMDRITFNGEWYREPLGSFSTGPPYIRHWNNDVMRTFKLFEDLNNELYEKMEKTLPGFDKIVNKIQHDFYTRIEKLTEKKNAEKREARKKAGLPEYEWHEKSPYEKSP* 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3362 518 Coils Coil 328 348 - -
Lja3g3362 518 Pfam GYF domain 2 238 283 IPR025640 -
Lja3g3362 518 PANTHER PROTEIN TIC 56, CHLOROPLASTIC 1 505 IPR037471 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3362 - - gmx:100801248 800.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3362 3 66342079 66346791 Lja3g3362 3 66342079 66346791 ECH