Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3322 ATGATGTCTAGTCAAGGATGGCCAGAGCCAGTGAGTCGAGTCCAAGCCTTAGCTGAAAGTGGCATAAGCTCAATCCCTGAACGTTTCATAAAGCCCACGTCCCAAAGACCCACCAAGACCACCTTCACTAATAACCATGCTTCTGAGGTTCATGATGATGAGAACACCATCAATATCCCAGTGATTGATTTGCAACATGTCTATGGCGACGACTCGAGGCTCTGCGAGGAGACGCTAAAGCGTGTTTCTGAGGCGTGCAGAGAATGGGGCTTCTTCCAGGTGGTGAACCACGGGGTTAGCCACGAGTTGATGAAGCACGCGAGGGAGGTGTGGCGCGAGTTCTTTCACCTTCCTCATGAGGTGAAAGAGGACTATGCTAATTCTCCAACCACTTATGAAGGGTATGGAAGTCGCTTGGGTGTGAAAAAAGGTGCCATCTTGGATTGGAGTGACTACTTCTTTCTCCATTACATGCCTTCTTTGCTTAGGGACCAAGCTAAGTGGCCTTCCCTTCCAACATCTTTAAGGAATGTGATTGCTGAATATGGTGAGGAAATAGTTAAGCTTGGAGGAAGGATGCTTGAGTTAATGTCAATAAATCTTGGCCTGAGAGAGGATTTCCTTTTAGATGCATTCGGAGGAGAAGATGATATTGGAGCATGTTTAAGGGTAAATTTCTATCCAAAGTGTCCACAACCTGATCTCACTCTTGGACTCTCTTCTCACTCAGACCCTGGTGGAATGACCATTCTTCTCCCTGATGATTTTGTGTCTGGACTACAAGTACGCAGAGGAGAACATTGGGTCACAGTTAAACCTGTTCCAAATGCTTTCATCATCAATATTGGTGACCAAATTCAGGTGCTGAGCAATGCAATATACAAGAGCATAGAACACAGGGTGATGGTAAATTCAAACAAAGATCGAGTTTCATTGGCCTTCTTTTACAATCCCAGAAGTGATTTACTGATTAAACCTGCAGAGGAGCTTGTGACTAAGGACAGGCCAGCCCTCTACCCACCAATGACATTTGATGAGTACAGACTTTACATTAGGACAAAAGGACCCTGTGGAAAAGCACAAGTTGAATCCTTAATTTCCCAAACGTGA 1110 0.4514 MMSSQGWPEPVSRVQALAESGISSIPERFIKPTSQRPTKTTFTNNHASEVHDDENTINIPVIDLQHVYGDDSRLCEETLKRVSEACREWGFFQVVNHGVSHELMKHAREVWREFFHLPHEVKEDYANSPTTYEGYGSRLGVKKGAILDWSDYFFLHYMPSLLRDQAKWPSLPTSLRNVIAEYGEEIVKLGGRMLELMSINLGLREDFLLDAFGGEDDIGACLRVNFYPKCPQPDLTLGLSSHSDPGGMTILLPDDFVSGLQVRRGEHWVTVKPVPNAFIINIGDQIQVLSNAIYKSIEHRVMVNSNKDRVSLAFFYNPRSDLLIKPAEELVTKDRPALYPPMTFDEYRLYIRTKGPCGKAQVESLISQT* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3322 369 MobiDBLite consensus disorder prediction 27 45 - -
Lja3g3322 369 Pfam non-haem dioxygenase in morphine synthesis N-terminal 59 169 IPR026992 -
Lja3g3322 369 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 217 318 IPR005123 -
Lja3g3322 369 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 363 - -
Lja3g3322 369 Gene3D - 9 353 IPR027443 -
Lja3g3322 369 PRINTS Isopenicillin N synthase signature 278 304 - -
Lja3g3322 369 PRINTS Isopenicillin N synthase signature 82 99 - -
Lja3g3322 369 Pfam 2OG-Fe(II) oxygenase superfamily 220 318 IPR044861 -
Lja3g3322 369 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE 3 363 - -
Lja3g3322 369 SUPERFAMILY Clavaminate synthase-like 11 351 - -
Lja3g3322 369 MobiDBLite consensus disorder prediction 27 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3322 Lja-Chr3 65413191 65417220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g3322 14 365 Glycosyltransferase AT5G59530 31.856 3.77e-50 170
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3322 - - pvu:PHAVU_010G000300g 611.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3322 3 65413191 65417220 Lja3g3322 3 65413191 65417220 ECH