Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3314 ATGGGCGATTTCAATCTCGCACTGGTGATCGTTGCGATCGTGGTGTGCGTGATCGTGTTCCTCTTCAATGTCTACCTGCTCGTGAACTATCAGCACCCAGATGATGTGAACCAGGCTTACTTTCCCAAATTCGTCGTCGTTTTGGGACTCTCCGTCGCCGCTATTTCCATTCTCATGCTTCCGGCGGATGTCGCTAACCGTCAGGCCTGTCGCCACGCGATTTACAACGGCGCGTGTAACCTCACGCTCCCAATGAAGGACCTCTGGCTTGCCATCTACATTCTTGACGCGGTTCTCGTCTTCTTCGTCATCCCCTTTGCCATGTTCTTCTATGAAGGAGACCAGGATAAGAGTGTTGGTAAGAGGATTAAGAGCGCTCTGTTGTGGGTGGTGACCACTGCTATCGTCTGCGCTCTTGTTCTGGGTATTTTATACGGGCTTGTTGGTAAGGTGGATTTTACCGTAAGGCATCTCTCTTCTTCCACAAGCTCATTTCCTAGCTCATGGAACTTCAATAATGGTCAACCGTGTATTGGAAGTGGCACCAAGCAGTGTTCTGCATACTCTGCTAGTCCTTCATCAGAGAAAACCTGGACCATGAGAGCTACCTTTCCAGAATATGTTGTTGCTCTTGCTACTATTGTTGGATCTGTGCTTTTTGCTATATTTGGTGGTGTTGGTATCGCTTGTCTTCCATTGGGACTTATATTTTCATTTATTCGGCGTCCAAAGGCTGTAATCACTCGCTCACAATATATCAAGGAAGCAACTGAACTGGGTAAAAAAGCAAGAGAACTGAAGAAAGCAGCTGAGTCCCTTCATCAGGAAGAAAGAGGTGGTGCAAAGGGTAGAAAGTTCCGTAAAAATGTGAAATCAGTAGAAAAGGAGTTGTTTCAATTAGAAGAAGATGTAAAGCTTCTTGAGGAGATGTATCCACAAGGAGAAAAGGCTGAGACAACATGGGCACTAACAGTTCTTGGGTATCTGGCAAAATTTGTTTTAGGAATTTTAGGGTTTATTGTTTCTGTGGCATGGGTTGCTCATATCATTATCTATCTGTTAATTGATCCTCCACTTTCGCCTTTCCTGAATGAAGTTTTCATCAAGCTGGATGATATCTGGGGTCTTCTGGGTACAGCTGCATTTGCGTTTTTCTGCTTCTACCTTCTCCTTGCTGTGATTGCTGGTGCCATGATGCTTGGGCTGAGACTAGTCTTCATTACTATACATCCCATGAAGTAA 1242 0.4517 MGDFNLALVIVAIVVCVIVFLFNVYLLVNYQHPDDVNQAYFPKFVVVLGLSVAAISILMLPADVANRQACRHAIYNGACNLTLPMKDLWLAIYILDAVLVFFVIPFAMFFYEGDQDKSVGKRIKSALLWVVTTAIVCALVLGILYGLVGKVDFTVRHLSSSTSSFPSSWNFNNGQPCIGSGTKQCSAYSASPSSEKTWTMRATFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFIRRPKAVITRSQYIKEATELGKKARELKKAAESLHQEERGGAKGRKFRKNVKSVEKELFQLEEDVKLLEEMYPQGEKAETTWALTVLGYLAKFVLGILGFIVSVAWVAHIIIYLLIDPPLSPFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFITIHPMK* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3314 413 Coils Coil 256 276 - -
Lja3g3314 413 PANTHER BNAC05G43630D PROTEIN 1 413 - -
Lja3g3314 413 PANTHER LIMR FAMILY PROTEIN DDB_G0283707-RELATED 1 413 - -
Lja3g3314 413 Coils Coil 290 310 - -
Lja3g3314 413 Pfam LMBR1-like membrane protein 288 411 IPR006876 -
Lja3g3314 413 Pfam LMBR1-like membrane protein 9 276 IPR006876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3314 Lja-Chr3 65296271 65303181 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3314 K14617 - gmx:100796998 761.911