Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3304 ATGTCATCCTTCGGCAGCTCCGGTCAGCCGTTCGAAGACGACGGAGTCTTCCTCGGCTACGATCCCCGACTCCAGTCACAGCGCTTTGACTCGTTCTCCAACTTCGACGCCGACTCGGTCAAGGACTCGGCCGGTGACGATGCGTTCTCGTCTCAGGCGGTGCCGGAGACTCCTTCCCCGCCGCCGATCTACTCTGCAGGTGCGGGATTCGCCCCGTACTCACCAGAGCAGAACGGGGAGGGCGCTGGTGGAGGCTTCGTTGCTTCCGATGGCCCGATCTTGCCACCGCCGGCGGATTTCGCGCCGGAAGAGGGGTTTGCCTTGAGGGAGTGGCGAAGGGAGAACGCGATTCGATTGGAGGAGAAGGAGAAGAAGGAGAATGAGACGCGGTTGCAGATCTTAGAGGAAGCTGATGAGTACAAAATTGGGTTTTACAGGAAGCGTGAGGTTAATGTTGAGAACACCAAAGCTTCTAACAGGGAAAGAGAGAAGCTATTTTTGGCAAGCGGGGAGAAGTTCCATGCCGAAGCTGACAAAAACTACTGGAAGGCAATTGGTGAACTGATACCTCATGAAGTGCCTGCTATACAGAAAAGAGGGAAAAAGGACAAAGAGAAAAAGCCTTCCATCATTGTAATACAGGGGCCAAAGCCAGGGAAACCTACTGACCTTTCAAGAATGCGCCAGATATTACTGAAGCTCAAGCATAACCCCCCTCCACATATGAAGCCCAAGCCTCCTCCATCTTCAGAAACCAAAAAGGATGCTAAAACTGGACCTCCTGATGTAGCTGGTTCAAGTACTACACCTCCCAAGGCTGTGGCTGTGGCTACTTCAGAGGCGGTTGCTGTGGCTTGA 858 0.5361 MSSFGSSGQPFEDDGVFLGYDPRLQSQRFDSFSNFDADSVKDSAGDDAFSSQAVPETPSPPPIYSAGAGFAPYSPEQNGEGAGGGFVASDGPILPPPADFAPEEGFALREWRRENAIRLEEKEKKENETRLQILEEADEYKIGFYRKREVNVENTKASNREREKLFLASGEKFHAEADKNYWKAIGELIPHEVPAIQKRGKKDKEKKPSIIVIQGPKPGKPTDLSRMRQILLKLKHNPPPHMKPKPPPSSETKKDAKTGPPDVAGSSTTPPKAVAVATSEAVAVA* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3304 285 MobiDBLite consensus disorder prediction 35 101 - -
Lja3g3304 285 MobiDBLite consensus disorder prediction 192 285 - -
Lja3g3304 285 Pfam Clathrin light chain 103 209 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Lja3g3304 285 PANTHER CLATHRIN LIGHT CHAIN 1 279 IPR000996 GO:0005198|GO:0006886|GO:0016192|GO:0030130|GO:0030132
Lja3g3304 285 PANTHER CLATHRIN LIGHT CHAIN 3 1 279 - -
Lja3g3304 285 Coils Coil 108 139 - -
Lja3g3304 285 MobiDBLite consensus disorder prediction 194 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3304 Lja-Chr3 64816726 64819586 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3304 - - aprc:113850159 438.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3304 3 64816726 64819586 Lja3g3304 3 64816726 64819586 ECH