Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3206 ATGGTAACTTTGGTCCCAACTGTTGGAGCTGTCAACTTGGCACCGTTGAAATTGAATGGCTATAGCAATGGAACTCCTTTGACAAGCTCAGCATTCTTTGGAACTGGCTTGAAGAAAGTGAGTTCTGTGATTCCCAGCCAGAGGAATTTCAAGGTTTCTGCACAAATTGAATATGATGAGGAGAAGCAAACCTCAAAGGACAGATGGGCTGGACTTGCCTATGACATTTCAGATGACCAGCAAGATATTACAAGAGGGAAAGGAATGGTGGACACTCTCTTCCAAGCTCCCATGGAAAGTGGGACTCACTATGCTGTCATGAGTTCCTATGATTATATCAGTGCTGGTCTTCGCCAGTATAATTTGGACAACACCATGGATGGCTTCTACATTGCTCCTGCATTTATGGACAAAGTTGTTGTTCACATCACCAAGAACTTTCTAAGCTTGCCAAATATTAAGGTTCCTCTTATTTTGGGTGTTTGGGGAGGCAAAGGTCAGGGAAAATCATTTCAATGTGAGCTTGTCTTTGCAAAGATGGGAATCAACCCTATCATGATGAGTGCTGGAGAATTGGAAAGTGGAAATGCTGGGGAGCCTGCAAAGTTGATCCGGCAGAGATACCGCGAGGCTGCAGACATCATCAGAAAAGGAAAGATGTGCTGCCTCTTCATCAATGATCTTGATGCAGGAGCTGGTCGTATGGGCGGAACCACACAATACACAGTGAACAACCAGATGGTGAATGCTACCCTCATGAACATTGCTGACAACCCAACCAATGTCCAACTTCCTGGCATGTATAACAAGGAGGAGAATCCCCGTGTCCCCATCATCGTCACTGGTAATGACTTCTCAACATTGTATGCTCCTCTCATCCGTGATGGTCGAATGGAAAAATTCTACTGGGCACCGACTAGGGAAGACAGAATTGGTGTCTGCCAAGGTATTTTCAGAACAGATGGTATTCCCACCGATGACATTGTCAAGCTTGTTGACACCTTCCCTGGCCAATCTATTGACTTCTTTGGTGCCTTGAGGGCTAGAGTTTATGATGATGAAGTGAGGAAGTGGATTTCTGGTGTGGGAGTGGAGAATGTTGGGAGAAGGCTTGTGAACTCTAAAGAAGGACCTCCAACTTTCGAGCAACCAAAGATGAGTATTGAGAAGCTCCTAGAGTATGGAAACATGCTTGTGAAAGAGCAAGAGAATGTGAAGAGGGTTCAATTGGCTGACAAATACCTCAAAGAGGCAGCTCTTGGAGATGCAAATGAAGATGCCATCAACACTGGAAACTTCTATGGACAAGGAGCTCAGCATGTTCATGTTCCTATCCCTGAAGGTTGTACTGATCCTGCTGCTGAAAACTATGATCCAACAGCTAGAAGTGATGATGGAAGCTGCACATACAAATTTTAG 1419 0.4482 MVTLVPTVGAVNLAPLKLNGYSNGTPLTSSAFFGTGLKKVSSVIPSQRNFKVSAQIEYDEEKQTSKDRWAGLAYDISDDQQDITRGKGMVDTLFQAPMESGTHYAVMSSYDYISAGLRQYNLDNTMDGFYIAPAFMDKVVVHITKNFLSLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADIIRKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCQGIFRTDGIPTDDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVENVGRRLVNSKEGPPTFEQPKMSIEKLLEYGNMLVKEQENVKRVQLADKYLKEAALGDANEDAINTGNFYGQGAQHVHVPIPEGCTDPAAENYDPTARSDDGSCTYKF* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3206 472 Gene3D - 121 305 IPR027417 -
Lja3g3206 472 Gene3D - 306 418 - -
Lja3g3206 472 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE ACTIVASE, CHLOROPLASTIC-LIKE ISOFORM X1 1 471 - -
Lja3g3206 472 PANTHER - 1 471 IPR044960 -
Lja3g3206 472 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 126 331 IPR027417 -
Lja3g3206 472 Pfam ATPase family associated with various cellular activities (AAA) 161 302 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3206 Lja-Chr3 61991641 61995191 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3206 - - gmx:100795298 871.692