Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3204 ATGTCACGGCGTCACAAGACACCGCCGGCACAAACCCTCGGCATCCTCGCCTTCGAGGCCGGCAAGACCATGTGCCGCCTTGTTTCCCTCTACAACTCCCTCTCCGACGAACAGACCACCAATCTCCGCCGTGAGGTAATCAAGTCCAAGGGCGTATCTTACCTGAACTCCGACCAAGAATGCTTCCTCCTCAACCTTGCCGCCGCCGAGCGCCTCCAGGACCTCGATGCTGCCGCCTCCACCGTCTCCCGCTTAGGCCGAAAATGCTCAGACATAAGCCTCTCTCAATTTGACCGTGTGTATGCCGACCTCAAGCTCGGCCACATCAACCTCTGCAAGCTGCAGTATGGCTCCCGGACCGCCGGCAAACTCGTCAACAAAACAAAGAAGCTAGTCTTCGCTACCGCGGCCCTTCACTCCGCCATGTCATCCATGGCGGAGATGGAGGCCGCGGATAAGAAGATTCAGCAACGCTGCAAGACCGCCACCAACGAATATCTCAGCGAGAAGATAGCGTTTCAGAGGAAGGAAGTGCAGCATTACAAGGAAACATCATTGTGGGAGCAAACATTTGACAAAACGGTTGGAATCATGGCTAGGCTCGTCTGCATTGTATATTCCAGAATATGCTCTGTTTTCGGATCCTACAACGATGGTTTTTGCCTCCTTGAACACCGCGAGCTGTATAAAATGATGCAGGAATCAGTTCACAAGCGCGTGACAAAATTTGCAGCTGTGACTGGCAATGGTGGTGATAAGGTTTTGGGGCTGGCGCCACCGTCTACAGTAGGCGGGGCGGGGCTTTCAGTAAGGTACGCGGAGGTGATACTGTTTGCGGAGCGGTGGCTGCACGCGCCGGAGACGGTGGGAGAGGGGGCGCGGGAGGTGTTGTATGAGATGCTGCCGGAGAGGTTGAGGGGGAAGGTGAGGGCGAAGCTAAGGGGGAGATTGGTGGAGGAGGAGGGGGTATTGCTGGCGGATGGATGGCGGGAGGCGGTGGAGGAGCTGATGGAGTGGCTGTCGCCGGTTGCGCAGGACACCGTGCAGTGGCAGGCTGAGAGGCATTTGGAGACGGCGCAGTTCGAGACGAGGCCGACGGTGCTGCGGATGCAGACGCTGCATTACTCGGACTTGGAGAAGGCGGAGGCGGCGATTGTGGAGGTGTTGGTGGGGTTGAGTTGTATATATTGGTGTGAGAGACGGTGA 1206 0.5705 MSRRHKTPPAQTLGILAFEAGKTMCRLVSLYNSLSDEQTTNLRREVIKSKGVSYLNSDQECFLLNLAAAERLQDLDAAASTVSRLGRKCSDISLSQFDRVYADLKLGHINLCKLQYGSRTAGKLVNKTKKLVFATAALHSAMSSMAEMEAADKKIQQRCKTATNEYLSEKIAFQRKEVQHYKETSLWEQTFDKTVGIMARLVCIVYSRICSVFGSYNDGFCLLEHRELYKMMQESVHKRVTKFAAVTGNGGDKVLGLAPPSTVGGAGLSVRYAEVILFAERWLHAPETVGEGAREVLYEMLPERLRGKVRAKLRGRLVEEEGVLLADGWREAVEELMEWLSPVAQDTVQWQAERHLETAQFETRPTVLRMQTLHYSDLEKAEAAIVEVLVGLSCIYWCERR* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3204 401 Pfam Protein of unknown function (DUF668) 262 348 IPR007700 GO:0045927
Lja3g3204 401 PANTHER BNAC09G50660D PROTEIN 7 401 - -
Lja3g3204 401 PANTHER OS10G0380300 PROTEIN 7 401 - -
Lja3g3204 401 Coils Coil 145 165 - -
Lja3g3204 401 Pfam Domain of unknown function (DUF3475) 15 70 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3204 Lja-Chr3 61952806 61954715 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3204 - - gmx:100796635 507.294