Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3199 ATGAAGCATTTGTTGGGTGGGCCTGGAACGGTTAGCGGGTGCTTGTTGAGGATAGGACAATGTGCATTTGGTGCTGCTTCGATTGGCCTCATGGTCACAGCTTTTGGCTTCTCTACTTACACTGCTTTCTGCTATTTGATTGCATCAATGGGACTTCAAGTGCTCTGGAGCTTGGGACTTGCATGTCTTGATATTTATGCCTTGAGAAAAAAGAGAGACCTACAAAATCCAATTCTTGTCAGCCTGTTTGTTGTTGGTGATTGGGTGACATCGACTTTGTCACTGGCAGCGGCGTGCTCGTCAGCAGGAATTGTAGTTTTGTACACAAGAGACCTAGACTTATGCGCTACTCGCAAGGGTAATCCTTGCAACAGGTACCAGATTTCTGTAGCCATGGCTTTTATCACCTGGTTTTTTACTGCAATGTCATCCCACGTCATGTTTTGGATCTTGGCGTCCGACTAG 465 0.4624 MKHLLGGPGTVSGCLLRIGQCAFGAASIGLMVTAFGFSTYTAFCYLIASMGLQVLWSLGLACLDIYALRKKRDLQNPILVSLFVVGDWVTSTLSLAAACSSAGIVVLYTRDLDLCATRKGNPCNRYQISVAMAFITWFFTAMSSHVMFWILASD* 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3199 154 PANTHER CASP-LIKE PROTEIN 5B3 1 153 IPR045009 -
Lja3g3199 154 Pfam Casparian strip membrane protein domain 8 139 IPR006702 -
Lja3g3199 154 PANTHER CASP-LIKE PROTEIN 1 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3199 Lja-Chr3 61801268 61804151 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3199 - - gmx:100306188 266.544