Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3198 ATGGTGTCAGCAATCAAGTTCTTTCAGCTGAACACAGGGGCTAAAATCCCTTCCGTTGGCCTTGGAACCTGGCAAGCTGATCCTGGTGTTGTAGCCAAAGCTGTCACCACTGCCATTCAGGTTGGATACAGGCATATTGATTGTGCTCAAGCCTACAATAATCAAGCTGAGATTGGTTCTGCACTCAAGAAGCTTTTTGATGATGGTGTGGTTAAGCGCGAGGACTTATGGATCACCTCCAAACTCTGGTGCTCAGATCATGCTCCAGAAGATGTGCCAATAGCATTTGATAGAACTTTGCAGGATTTGCAGCTTGACTACATTGACCTCTATCTGATCCACTGGCCAATCCGCACGAAAAAGGGAGCAGTTGGATTTAAGCCTGAAAATCTTGATCAACCTGACATACCCAGCACATGGAGAGCAATGGAAGCACTGTTCGACTCTGGCAAGGCGAAGGCTATAGGAGTGAGCAATTTCTCGTCAAAGAAGCTTCAAGATCTGCTGGAGATAGCTAGAGTGCCTCCTGCTGTCAACCAAGTGGAATTGCACCCAGGATTTCAGCAGCCAAAGTTGCATGCGTTCTGTGAATCTAAAGGAATTCATCTAACTGGATATTCACCACTGGGCTCACCAGGAGTTTTCAACAGCGACATCCTTAAGACATCAGTGATCACAGAAGTTGCTGAGAAATTAGGGAAGACGCCAGCCCAAGTTGCTCTCCGGTGGGGCCTGCAAGCAGGACATAGTGTGCTGCCTAAGAGCACAACTGAGGTCAGGATCAAGCAAAATTTTGATGTATTTGACTGGTCTATTCCTGAAGGCCTGTTTGCCAAGTTCTCTGAAATTAAGCAGGAGAGGCTAATTAAGGGTACTTTTGCTGTTCACGAGACCTATGGTGCCTATAGGAACGTTGAAGAACTCTGGGATGGTGAACAGTGA 942 0.4682 MVSAIKFFQLNTGAKIPSVGLGTWQADPGVVAKAVTTAIQVGYRHIDCAQAYNNQAEIGSALKKLFDDGVVKREDLWITSKLWCSDHAPEDVPIAFDRTLQDLQLDYIDLYLIHWPIRTKKGAVGFKPENLDQPDIPSTWRAMEALFDSGKAKAIGVSNFSSKKLQDLLEIARVPPAVNQVELHPGFQQPKLHAFCESKGIHLTGYSPLGSPGVFNSDILKTSVITEVAEKLGKTPAQVALRWGLQAGHSVLPKSTTEVRIKQNFDVFDWSIPEGLFAKFSEIKQERLIKGTFAVHETYGAYRNVEELWDGEQ* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3198 313 Gene3D - 4 313 IPR036812 -
Lja3g3198 313 ProSitePatterns Aldo/keto reductase family putative active site signature. 252 267 IPR018170 GO:0016491
Lja3g3198 313 PIRSF AKR 1 305 IPR020471 GO:0016491
Lja3g3198 313 Pfam Aldo/keto reductase family 19 283 IPR023210 -
Lja3g3198 313 ProSitePatterns Aldo/keto reductase family signature 2. 143 160 IPR018170 GO:0016491
Lja3g3198 313 SUPERFAMILY NAD(P)-linked oxidoreductase 5 284 IPR036812 -
Lja3g3198 313 CDD AKR_AKR4C1-15 6 290 IPR044498 GO:0016491
Lja3g3198 313 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Lja3g3198 313 PRINTS Aldo-keto reductase signature 177 206 IPR020471 GO:0016491
Lja3g3198 313 PRINTS Aldo-keto reductase signature 219 243 IPR020471 GO:0016491
Lja3g3198 313 PRINTS Aldo-keto reductase signature 98 116 IPR020471 GO:0016491
Lja3g3198 313 PRINTS Aldo-keto reductase signature 143 160 IPR020471 GO:0016491
Lja3g3198 313 PANTHER ALDO/KETO REDUCTASE 4 312 - -
Lja3g3198 313 PANTHER ALDO/KETO REDUCTASE FAMILY OXIDOREDUCTASE 4 312 - -
Lja3g3198 313 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3198 Lja-Chr3 61789847 61792886 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3198 K00002 - gmx:100801791 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3198 3 61789847 61792886 Lja3g3198 3 61789847 61792886 ECH