Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3196 ATGTCAAACGACATTCGATTCTTCAATCTCAACCCTGGAGCCAAGATCCCTTCTGTCGGCTTGGGAACCTGGCAGTCCGATCCAGGTGTCGTCGGTGAAGCTGTTGCTGCTGGTATCAAGGTTGGTTACCGCCACATTGACTGTGCTCAAATGTATGGCAATGAGAAGGAGATCGGCTCTGTATTGAAGAAGCTATTTGAAGAGGGTATAGTGAAGCGTGAGGATTTGTGGATTACGTCTAAACTCTGGAATACTGATCATGCTCCAGAGGATGTACCGCTAGCATTGGACAGGACTTTGACAGACTTGCAGCGTGATTATGTAGATTTGTATCTTATCCACTGTCCTGCTCCAATGAAGAAAGGATCAGAGGGATTTAAGCCTGAAAATCTAATACAATCTAACATACCTGCCACTTGGAAGGCAATGGAAGCACTCTATGACTCTGGCAAGGCACGAGCTATTGGTGTCAGTAATTTCTCCTCCAAGAAGCTGGCGGATTTGCTGGAGGTTGCCTGCATTCCTCCTGCTGTCAACCAGGTGGAGTGTCATCCGTCATGGCAGCAGGACAAACTGCGTGAATTCTGCAAATCCAAAGGTGTCCACCTCTCTGGTTTTTCACCTTTGGGTTCCCCTGGAACAACCTGGCTTAAAAGTGATGTCCTCAAGCATCCAGTTATAAATTTGATTGCGGAGAAACTAGGCAAGACTCCTGCTCAGGTAGCTCTTCACTGGGGACTGAAAACGGGCAATAGTGTGCTTCCCAAAAGTACAAATGAAGCAAGAATGAAACAAAATTTTGATGTTTTTGACTGGACTATACCTGAGGACTTACTAGCTAAATTTTCTGAGATTCAACAATTTTCATTGCAGGCCTCATTCGTCCATGAAACTTATGGGAGCTACAGATCTCTTGAAGAATTTTGGGATGGTGAAATTTAG 942 0.4512 MSNDIRFFNLNPGAKIPSVGLGTWQSDPGVVGEAVAAGIKVGYRHIDCAQMYGNEKEIGSVLKKLFEEGIVKREDLWITSKLWNTDHAPEDVPLALDRTLTDLQRDYVDLYLIHCPAPMKKGSEGFKPENLIQSNIPATWKAMEALYDSGKARAIGVSNFSSKKLADLLEVACIPPAVNQVECHPSWQQDKLREFCKSKGVHLSGFSPLGSPGTTWLKSDVLKHPVINLIAEKLGKTPAQVALHWGLKTGNSVLPKSTNEARMKQNFDVFDWTIPEDLLAKFSEIQQFSLQASFVHETYGSYRSLEEFWDGEI* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3196 313 PANTHER ALDO/KETO REDUCTASE 3 312 - -
Lja3g3196 313 ProSitePatterns Aldo/keto reductase family putative active site signature. 254 269 IPR018170 GO:0016491
Lja3g3196 313 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Lja3g3196 313 PRINTS Aldo-keto reductase signature 221 245 IPR020471 GO:0016491
Lja3g3196 313 PRINTS Aldo-keto reductase signature 177 206 IPR020471 GO:0016491
Lja3g3196 313 PRINTS Aldo-keto reductase signature 143 160 IPR020471 GO:0016491
Lja3g3196 313 PRINTS Aldo-keto reductase signature 98 116 IPR020471 GO:0016491
Lja3g3196 313 CDD AKR_AKR4C1-15 6 287 IPR044498 GO:0016491
Lja3g3196 313 ProSitePatterns Aldo/keto reductase family signature 2. 143 160 IPR018170 GO:0016491
Lja3g3196 313 Gene3D - 4 313 IPR036812 -
Lja3g3196 313 PANTHER ALDO-KETO REDUCTASE FAMILY 4 MEMBER C9-LIKE 3 312 - -
Lja3g3196 313 SUPERFAMILY NAD(P)-linked oxidoreductase 7 285 IPR036812 -
Lja3g3196 313 Pfam Aldo/keto reductase family 20 285 IPR023210 -
Lja3g3196 313 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
Lja3g3196 313 PIRSF AKR 1 308 IPR020471 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3196 Lja-Chr3 61689499 61702599 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3196 K00002 - gmx:100781137 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3196 3 61689499 61702599 Lja3g3196 3 61689499 61702599 ECH