Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3194 ATGTCGAACGAGATTCAATTCTTCCAACTCAACACCGGAGCCAAGATCCCTTCCGTCGGCTTGGGAACCTGGCAGTCCGATCCCGGCGTCGTCGGTCAAGCTGTCGCTGCTGCTATCAAGATTGGTTACCGTCACATTGACTGCGCTCAAATCTATGGCAATGAGAAGGAGATTGGCTCTGTATTGAAGAAGCTATTTGAGGATGGTGTAGTGAAGCGTGAGGATTTGTGGATTACGTCTAAACTCTGGAATACTGATCATGCCCCAGAAGATGTACCGCTAGCATTGGACAGGACTTTGAAGGACTTGCAGCTTGATTATGTTGACTTGTATCTTATCCACTGGCCTGCTCCAATGAAGAAAGGATCACAGGGCTTTAAGCCTGAAAATCTTGTACAACCTAACATACCTGCCACCTGGAAGGCAATGGAAGCACTCTATGACTCTGGCAAGGCACGAGCTATCGGTGTCAGTAATTTCTCCTCCAAGAAGCTGGGGGATTTGCTGGAGGTTGCTCGGATTCCTCCTGCGGTCAATCAGGTGGAGTGTCATCCATCATGGCAGCAGGACAAACTGCGTGATTTCTGCAAATCCAAAGGTGTCCACCTCTCTGGATATTCACCTCTGGGTTCCCCTGGAACAACCTGGCTTAAAAGTGATGTCCTCAACCATCCAGTTATAAATGTGATTGCGGAGAAACTAGGCAAGACTCCTGCTCAGGTAGCACTTCGCTGGGGACTGCAAAAGGGCAATAGTGTGCTTCCCAAAAGTACAAATGAAGCAAGGATAAAACAAAATTTTGATGTTTTTGACTGGACTATACCTGAGGACTTGTTAGCTAAATTTTCTGAGATTGAACAAGCTAGATTACTCAGGGGTGCCTCATTTGTCCATGAAACTTATGGGGGCTACAGATCTCTTGAGGAATTTTGGGATGGTGAAATCTGA 948 0.4684 MSNEIQFFQLNTGAKIPSVGLGTWQSDPGVVGQAVAAAIKIGYRHIDCAQIYGNEKEIGSVLKKLFEDGVVKREDLWITSKLWNTDHAPEDVPLALDRTLKDLQLDYVDLYLIHWPAPMKKGSQGFKPENLVQPNIPATWKAMEALYDSGKARAIGVSNFSSKKLGDLLEVARIPPAVNQVECHPSWQQDKLRDFCKSKGVHLSGYSPLGSPGTTWLKSDVLNHPVINVIAEKLGKTPAQVALRWGLQKGNSVLPKSTNEARIKQNFDVFDWTIPEDLLAKFSEIEQARLLRGASFVHETYGGYRSLEEFWDGEI* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3194 315 Pfam Aldo/keto reductase family 20 286 IPR023210 -
Lja3g3194 315 PANTHER ALDO-KETO REDUCTASE FAMILY 4 MEMBER C9-LIKE 3 314 - -
Lja3g3194 315 ProSitePatterns Aldo/keto reductase family putative active site signature. 254 269 IPR018170 GO:0016491
Lja3g3194 315 CDD AKR_AKR4C1-15 6 292 IPR044498 GO:0016491
Lja3g3194 315 ProSitePatterns Aldo/keto reductase family signature 2. 143 160 IPR018170 GO:0016491
Lja3g3194 315 PIRSF AKR 1 308 IPR020471 GO:0016491
Lja3g3194 315 PRINTS Aldo-keto reductase signature 177 206 IPR020471 GO:0016491
Lja3g3194 315 PRINTS Aldo-keto reductase signature 221 245 IPR020471 GO:0016491
Lja3g3194 315 PRINTS Aldo-keto reductase signature 38 62 IPR020471 GO:0016491
Lja3g3194 315 PRINTS Aldo-keto reductase signature 143 160 IPR020471 GO:0016491
Lja3g3194 315 PRINTS Aldo-keto reductase signature 98 116 IPR020471 GO:0016491
Lja3g3194 315 SUPERFAMILY NAD(P)-linked oxidoreductase 7 287 IPR036812 -
Lja3g3194 315 PANTHER ALDO/KETO REDUCTASE 3 314 - -
Lja3g3194 315 Gene3D - 4 315 IPR036812 -
Lja3g3194 315 ProSitePatterns Aldo/keto reductase family signature 1. 42 59 IPR018170 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3194 Lja-Chr3 61630118 61633306 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3194 K00002 - gmx:100781137 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3194 3 61630118 61633306 Lja3g3194 3 61630118 61633306 ECH