Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3154 ATGTCTCATTTACCTATTGATGCGACCCAACAAGCAGTGCCTCCTCACATGATCAAGCGACCTTGTGCAAATTTCCGTCCTAGTGTTTGGGGGGATTTTTTCCTTCAATATGATTCAGAATCTTTGAAAGTCGATGAAAATATGAAGCAACAAGTTCAGATGCAAAAAGAGGAAGTGAAAAAGATTTTTCTATCTTCAAACAATAGCATCTCAAAAAAACTAAACTTGATTGACTCTTTCCAACGTTTGGGTATATCTCATCATTTGGAAGATGAAATTGATGAAGTATTAGAACAAATTCACAACACTTTTACTAACAATAACATGATCACCATAAAAGAAGGTAGCCTTCACTTTCTTGCTTTAGCATTCCGTTTGCTTAGGCAAAAAGGATATCGCATTTCATCAGATATATTTGAACAATTCAAAAATAAGGAAGGAAACTTCAATGAAGAAGTTGCCAAAGATGTTCAAGGAATGTGGAGCTTGTATGAAGCTGCACAATTAAGGGTTGGAGGGGAAGATATATTTGATGAAGCACTTGATTTCACATACACTCATCTGAATTTCATGACTGATAAACTGAGTCCATCTCTCGCTGCTCAAATAACTCACTACTTAAGGAAACCTTTTCACAAGGGAGTTCCTAGACTGGAGTCAAGGCTTTACATGTCTTTCTATGAACAAGATCCTTCTCATAGCAAAGTTCTTCTAACCTTTGCAAAGTTAGATTTCAACATGCTACAAAAATTGCATCAAAAAGAAGTTGCCAGTATCACCAGGTGGTGGAAAAATTCAGACTTTGCGGCAAAGGTCCCTTACGTGAGGGATAGAGTAGTTGAGGTTTACTTTTGGCCATTTACAATGTCTTATGAAGCTAAATACAGCACTTCAAGAAGGATAGTGGCTAAACTGATTGCATGTGTCACTCTTCTAGATGATACTTATGATGCCTACGGTACAATTGAAGAACTTGAACTATTCACGCAGGCACTCCAAAGATGGGATATTAGTGTCATTCAATCTCTTCCAGAGTGCATTAAAGTGGTATTTACAGCAACTGTAGAACTATGGGATGACATAGAGACCACTACAGCAGTGGATGGAAAATTGGGTTGGGTGTTGCCATATATTAAACAAGCTTTTTATAACTTGGCACAATCCTACTTTGTTGAATCTAAATGGTGTCATGAGAACTATGTTCCAACATATAATGAATACAAGGGTAATGGAGTTGGATCTTCTACCTTGCGACTTCTAATAATATCATTCATTGGCTTGGGAGAATTTTCAACGAAAGAGTTGATTGACTGGATTTTCACCAATCCAACAATCATCGAAGCTATATCAATTATTGGCAGACTCGTGGATGACATGGCCTCGCATAAGTTTGAGCAGCAAAGAGTGCATGTTGCTTCAGCAGTTGAATGTTGTATGAAGCAATATGACATTTCACAAGAAGCAGCCTATAAATTAATGCAGAAGGACGTCAAAGATTTATGGATGGTGGTAAATGAAGAGTGTCTCAAGTTAGACTACATTCCAAAGCCCGTGCTTGATTGCATTCTTAATTTATCACGAGCGAATGAGTTTATGTACGACAACTTTGAAGATAGATTCACAGATGGGAAACTGTTGAAGGAATACATGGTTGCACTGCTAGTAGATCCAATCCAATAA 1680 0.3756 MSHLPIDATQQAVPPHMIKRPCANFRPSVWGDFFLQYDSESLKVDENMKQQVQMQKEEVKKIFLSSNNSISKKLNLIDSFQRLGISHHLEDEIDEVLEQIHNTFTNNNMITIKEGSLHFLALAFRLLRQKGYRISSDIFEQFKNKEGNFNEEVAKDVQGMWSLYEAAQLRVGGEDIFDEALDFTYTHLNFMTDKLSPSLAAQITHYLRKPFHKGVPRLESRLYMSFYEQDPSHSKVLLTFAKLDFNMLQKLHQKEVASITRWWKNSDFAAKVPYVRDRVVEVYFWPFTMSYEAKYSTSRRIVAKLIACVTLLDDTYDAYGTIEELELFTQALQRWDISVIQSLPECIKVVFTATVELWDDIETTTAVDGKLGWVLPYIKQAFYNLAQSYFVESKWCHENYVPTYNEYKGNGVGSSTLRLLIISFIGLGEFSTKELIDWIFTNPTIIEAISIIGRLVDDMASHKFEQQRVHVASAVECCMKQYDISQEAAYKLMQKDVKDLWMVVNEECLKLDYIPKPVLDCILNLSRANEFMYDNFEDRFTDGKLLKEYMVALLVDPIQ* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3154 559 SUPERFAMILY Terpenoid synthases 233 558 IPR008949 -
Lja3g3154 559 Gene3D Farnesyl Diphosphate Synthase 27 543 IPR008949 -
Lja3g3154 559 Pfam Terpene synthase family, metal binding domain 238 501 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lja3g3154 559 PANTHER OS04G0344100 PROTEIN-RELATED 5 556 - -
Lja3g3154 559 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 5 556 - -
Lja3g3154 559 CDD Terpene_cyclase_plant_C1 20 557 IPR044814 GO:0010333|GO:0016102
Lja3g3154 559 SFLD Isoprenoid Synthase Type I 235 559 - -
Lja3g3154 559 SFLD Terpene Cyclase Like 1 C Terminal Domain 235 559 IPR034741 -
Lja3g3154 559 Pfam Terpene synthase, N-terminal domain 29 207 IPR001906 GO:0010333|GO:0016829
Lja3g3154 559 Gene3D - 68 233 IPR036965 GO:0010333|GO:0016829
Lja3g3154 559 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 27 233 IPR008930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3154 Lja-Chr3 60492763 60499476 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3154 K15803 K14183 gmx:100781367 649.818