Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3153 ATGTCTTCTTTACCTGTTGGTGCGACCCAACAAGCAGTGCCTCCTCACATCAAGCGACCTTGTGCAAATTTCCGTCCTAGTGTTTGGGGGGATTTCTTCCTTCAATATGATTCAGAATCTTTGAAAGAAGTGAAAAAGATTTTTCTATCTTCAAACAATAGCATCTCAAAAAAACTAAACTTGATTGACTCTTTCCAACGTTTGGGTATATCTCATCATTTGGAAGATGAAATTGATGAAGTATTAGAACAAATTCACAACACTCTTACTAACAATAACATGATCACCATAAAAGAAGGTAGCCTTCACTTTCTTGCTTTAGCATTCCGTTTGCTTAGGCAAAAAGGATATCGCATTTCATCAGGGGAAGATATATTTGATGAAGCACTTGATTTCACATACACTCATCTGAATTTCATGACTGATAAACTGAGTCCATCTCTTGCTGCTCAAATAACTCACTACTTAAGGAAACCTTTTCACAAGGGAGTTCCTAGACTGGAGTCAAGGCTTTACATCAAAGTTCTTCTAACCTTTGCAAAGTTAGATTTCAACATGCTACAAAAATTGCATCAAAAAGAAGTTGCCAGTATCACCAGGTGGTGGAAAAATTCAGACTTTGCGGCAAAAGTCCCTTACGTGAGGGATAGAGTAGTTGAGGTTTACTTTTGGCCATTTACAATGTCTTATGAAGCTAAATACAGCACTTCAAGAAGGATAGTGGCTAAACTGATTGCATGTGTCACTCTTCTAGATGATACTTATGATGCCTACGGTACAATTGAAGAACTTGAACTATTCACGCAGGCACTCCAAAGATGGGATATTAGTGTCATTCAATCTCTTCCAGAGTGCATAAAAGTGGTATTTACAGCAACTGTAGAACTATGGGATGACATAGAGACCACTACAGCAGTGGATGGAAAATTGGGTTGGGTGTTGCCATATATTAAACAAGCTTTTTATAACTTGGCACAATCCTACTTTGTTGAATCTAAATGGTGTCATGAGAGCTATGTTCCAACATATAATGAATACAAGGGTAATGGAGTTGGATCTTCTCCCTTGCGACTTCTAATAATATCATTCATTGGCTTGGGAGAATTTTCAACGAAAGAGTTGATTGACTGGATTTTCACCAATCCAACAATCATCGAAGCTATGTCAATTATTGGCAGACTCGTGGATGACATGGCCTCGCATAAGTTTGAGCAGCAAAGAGTGCATGTTGCTTCAGCAGTTGAATGTTGTATGAAGCAATATGACATTTCACAAGAAGAAGCCTATAAATTAATGCACAAGGACATCAAAGATTTATGGATGGTGGTAAATGAAGAGTGTCTCAAGTTAGACTACATTCCAAAGCCCGTGCTTGATTGTATTCTTAATTTATCACGAGCAAATGAGTTTATGTACGACAACTTTGAAGATAGATTCACAGATGGGAAACTGTTGAAGGAATACATGGTTGCACTGCTAGTAGATCCAATCCAATAA 1497 0.3788 MSSLPVGATQQAVPPHIKRPCANFRPSVWGDFFLQYDSESLKEVKKIFLSSNNSISKKLNLIDSFQRLGISHHLEDEIDEVLEQIHNTLTNNNMITIKEGSLHFLALAFRLLRQKGYRISSGEDIFDEALDFTYTHLNFMTDKLSPSLAAQITHYLRKPFHKGVPRLESRLYIKVLLTFAKLDFNMLQKLHQKEVASITRWWKNSDFAAKVPYVRDRVVEVYFWPFTMSYEAKYSTSRRIVAKLIACVTLLDDTYDAYGTIEELELFTQALQRWDISVIQSLPECIKVVFTATVELWDDIETTTAVDGKLGWVLPYIKQAFYNLAQSYFVESKWCHESYVPTYNEYKGNGVGSSPLRLLIISFIGLGEFSTKELIDWIFTNPTIIEAMSIIGRLVDDMASHKFEQQRVHVASAVECCMKQYDISQEEAYKLMHKDIKDLWMVVNEECLKLDYIPKPVLDCILNLSRANEFMYDNFEDRFTDGKLLKEYMVALLVDPIQ* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3153 498 Pfam Terpene synthase, N-terminal domain 38 121 IPR001906 GO:0010333|GO:0016829
Lja3g3153 498 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 26 174 IPR008930 -
Lja3g3153 498 CDD Terpene_cyclase_plant_C1 19 496 IPR044814 GO:0010333|GO:0016102
Lja3g3153 498 PANTHER OS04G0344100 PROTEIN-RELATED 123 495 - -
Lja3g3153 498 PANTHER OS04G0344100 PROTEIN-RELATED 3 121 - -
Lja3g3153 498 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 123 495 - -
Lja3g3153 498 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 3 121 - -
Lja3g3153 498 SFLD Isoprenoid Synthase Type I 174 498 - -
Lja3g3153 498 Gene3D Farnesyl Diphosphate Synthase 26 52 IPR008949 -
Lja3g3153 498 Gene3D - 53 121 IPR036965 GO:0010333|GO:0016829
Lja3g3153 498 Gene3D Farnesyl Diphosphate Synthase 177 497 IPR008949 -
Lja3g3153 498 Pfam Terpene synthase family, metal binding domain 177 440 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lja3g3153 498 SFLD Terpene Cyclase Like 1 C Terminal Domain 174 498 IPR034741 -
Lja3g3153 498 SUPERFAMILY Terpenoid synthases 174 497 IPR008949 -
Lja3g3153 498 Gene3D - 122 176 IPR036965 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3153 Lja-Chr3 60454529 60458303 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3153 K15803 - gmx:100781367 561.607