Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3152 ATGAAGCAACAAGTTCAAATGCAAAAAGTGGAAGTGAAAAAGATTTTTCTATCTTCAGATGATAACATCTTTCAAAAACTTAACTTGATTGACACTATGCAACGTTTGGGCATATCTTATCATTTGGAAGAAGAAATTGATGACGCATTAGAACAAATCCACAACTCTTTTACCAACAATAACACCACTGTAGAAGAATTATTCAATATTGCAATTGTGGAACTATTGGATGAAATAGAGATGATTACTACAGAGGATGGAAAAACGAGTTTGGTGTGTCCATATATTAAACAAGAATTTTATAACTTGGCACACGCTTACTTGATAGAAGCTAAATGGTCTAGATCTTCTACCTTGCCACTTCTATTGCCCTCTTTCCTTTGCTTGGGAGAATTATCAACCAAAGAAATGCTTGATTGGATTTTCAGCTATCCAACAATCATTGAAGCTGTTTCAAGTATCGGTAGACTCCTTGATGACATATCCTCACACAAGTTTGAGCAGCAAAGAGTACATGTTGCTTCAGCAGTTGAATGTTGTATGAAGCAATATGACATTTCACAAGAAGAGGCTTATAAGTTTGTTCACAAGGACATCTTAGATTTATGGATGGTCGTAAATGAAGAGTGTCTCAAGTTAGACTACATTCCAAAGTCTATGCTTGAATGTATTATTAATGTGGCGCGAGTGTCTGAGTTTACCTACGAAAACTTTAAGGATAGGCACATAAATGCGGAACTGCTAAAAGAATATGTGGTTGCACTGCTTGTAGAGCCAATAAGCATTGAGTAG 792 0.3586 MKQQVQMQKVEVKKIFLSSDDNIFQKLNLIDTMQRLGISYHLEEEIDDALEQIHNSFTNNNTTVEELFNIAIVELLDEIEMITTEDGKTSLVCPYIKQEFYNLAHAYLIEAKWSRSSTLPLLLPSFLCLGELSTKEMLDWIFSYPTIIEAVSSIGRLLDDISSHKFEQQRVHVASAVECCMKQYDISQEEAYKFVHKDILDLWMVVNEECLKLDYIPKSMLECIINVARVSEFTYENFKDRHINAELLKEYVVALLVEPISIE* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3152 263 PANTHER OS04G0344100 PROTEIN-RELATED 70 259 - -
Lja3g3152 263 PANTHER OS04G0344100 PROTEIN-RELATED 1 72 - -
Lja3g3152 263 Gene3D - 1 77 IPR036965 GO:0010333|GO:0016829
Lja3g3152 263 Pfam Terpene synthase, N-terminal domain 2 69 IPR001906 GO:0010333|GO:0016829
Lja3g3152 263 Gene3D Farnesyl Diphosphate Synthase 115 263 IPR008949 -
Lja3g3152 263 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 70 259 - -
Lja3g3152 263 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 2 71 IPR008930 -
Lja3g3152 263 SUPERFAMILY Terpenoid synthases 61 262 IPR008949 -
Lja3g3152 263 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 1 72 - -
Lja3g3152 263 Pfam Terpene synthase family, metal binding domain 46 203 IPR005630 GO:0000287|GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3152 Lja-Chr3 60383382 60414435 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3152 - K15803 mtr:MTR_2g082050 249.98