Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3128 ATGTCTCTTGCACCTACTGATTCGACCCAACATGCAGCAGCATCTCACATCACAAGACCTTGTGTCAATTTTCCTCCTAGCATTTGGGGAGATTTTTTCCTTCAATATGATTCTGAATCCTTGGAGCTCAACGACAATATGAAGCAACAAGTTGAAATGCAAAAAGAGGAAGTGAAGAAGATATTTCTATCTTCAAGTGAAATAGATGAAACATTAGAACAAATCCACAAAAATTTTACTAACAATAACATGATCACCATCAAAGGTAGCTTGCACTTTCTTGCGTTAGCATTTCGCTTGCTTAGACAAAAAGGATATCGCATTTCATCAGATATATTTGAACAATTCAAGAATAAGAAAGGAAACTTCAATGAAAAAGTTGCCAAAGATGTTGAAGGAATGTGGAGCTTGTACGAAGCAGCGCAATTAAGGGTTCAAGGGGCAGACATACTTGATGAAGCACTTGATTTCACATACACTCATTTGAATTCCGTGACTGATAAACTGAGTCCATCTCTTGCTGCTCAAATAAGTCACCACTTAAGGAAACCTTTTCACAAGAGATTTCCTAGGCTGGAGTCAAGGTGTTACATCTCTTTCTATGAACAAGATCCTTCTCATATCAAAGTTCTTCTAACCTTTGCAAAGTTAGATTTCAACATGCTACAAAAATTGCATCAAAAAGAACTTGGAAGTATCACCAGGTGGTGGAAAAAATCAGAGTTTGCGACAAAGGTCCCTTATGCTAGGGAAAGAGTGGTTGAAGGTGAATTTTGGCCATTGGCCATGTCCTATGAGCCTAAATATAGCATTGAGAGAAAGATAGTCGGCAAATTGGTTGCATGTATCTCTGTGCTTGATGATACTTATGACGCCTTTGGCACAATTGAAGAACTTGAACTCTTCACCCAGGCAATCCAAAGATGGGATATTAGCCTTATTCAATCTCTTCCAGAATGCATGAATGTTGTGTATAGCGCAATTGTAGGACTTTGGGATGAAATAGACATGACTATTGCAGAAGAAAGAAAATCGGCTTTGGTGTTGCCATATATTAAACATGCCTTCTATAACTTGGCACAATCCTACTTTATTGAAACTAAATGGTGTCATGAGAGCTATGTTCCAACATATGATGAATACAAGGCTAACGGAGTTGTATCTTCTACATGCCCACTTCAAATAGTATCGTTTGTTGGCCTGGGAGAATTTTCAACCAAAGAGTTGCTTGATTGGATTTCCAGCAATCCAAGAATCATTGAAGCTGTATCAATTACTAGCAGACTCATGGATGACATATCCTCACATAAGTTTGAGCAGCAAAGGGTACATGTTGCTTCAGCAGTTGAATGTTGTATGAAGCAATATAACATTTCACAAGAAGAGGCTTATAAGCTCATTCACAAGGACATGACAGATTTATGGATGGTTATAAATGAAGAGTGTCTCAAGTTAGATCGCATCCCCAACCCCGTGCTTGAATGTATTCTTAATGTGGCGCGAGTGACTGAGTTTACCTATGAAAACTTTGAGGATAGGTACACAAATGCGGAACTGCTGAAAGAATATGTGGTTTCACTGCTAGTAGACCCAATATAA 1599 0.3846 MSLAPTDSTQHAAASHITRPCVNFPPSIWGDFFLQYDSESLELNDNMKQQVEMQKEEVKKIFLSSSEIDETLEQIHKNFTNNNMITIKGSLHFLALAFRLLRQKGYRISSDIFEQFKNKKGNFNEKVAKDVEGMWSLYEAAQLRVQGADILDEALDFTYTHLNSVTDKLSPSLAAQISHHLRKPFHKRFPRLESRCYISFYEQDPSHIKVLLTFAKLDFNMLQKLHQKELGSITRWWKKSEFATKVPYARERVVEGEFWPLAMSYEPKYSIERKIVGKLVACISVLDDTYDAFGTIEELELFTQAIQRWDISLIQSLPECMNVVYSAIVGLWDEIDMTIAEERKSALVLPYIKHAFYNLAQSYFIETKWCHESYVPTYDEYKANGVVSSTCPLQIVSFVGLGEFSTKELLDWISSNPRIIEAVSITSRLMDDISSHKFEQQRVHVASAVECCMKQYNISQEEAYKLIHKDMTDLWMVINEECLKLDRIPNPVLECILNVARVTEFTYENFEDRYTNAELLKEYVVSLLVDPI* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3128 532 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 25 207 IPR008930 -
Lja3g3128 532 CDD Terpene_cyclase_plant_C1 19 531 IPR044814 GO:0010333|GO:0016102
Lja3g3128 532 Gene3D - 66 207 IPR036965 GO:0010333|GO:0016829
Lja3g3128 532 SUPERFAMILY Terpenoid synthases 209 532 IPR008949 -
Lja3g3128 532 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 66 530 - -
Lja3g3128 532 Gene3D Farnesyl Diphosphate Synthase 208 518 IPR008949 -
Lja3g3128 532 PANTHER TERPENE SYNTHASE FAMILY, METAL-BINDING DOMAIN PROTEIN 4 66 - -
Lja3g3128 532 SFLD Terpene Cyclase Like 1 C Terminal Domain 209 532 IPR034741 -
Lja3g3128 532 SFLD Isoprenoid Synthase Type I 209 532 - -
Lja3g3128 532 Pfam Terpene synthase family, metal binding domain 212 475 IPR005630 GO:0000287|GO:0010333|GO:0016829
Lja3g3128 532 PANTHER OS04G0344100 PROTEIN-RELATED 4 66 - -
Lja3g3128 532 PANTHER OS04G0344100 PROTEIN-RELATED 66 530 - -
Lja3g3128 532 Pfam Terpene synthase, N-terminal domain 66 181 IPR001906 GO:0010333|GO:0016829
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3128 Lja-Chr3 59826225 59828886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3128 K15803 K14183 gmx:100781367 640.573