Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3110 ATGTATAGCAATAGCACCCTCTTAAAGAACCAGCAGAAGCAGAAGAAAGAAATGAAGGGCCAAGAACAAATCAAAATGTCTAAGGTTATCAAAATTGATTCTCAGAAATCATGGGAGCATCACATCTTCTATGCTACCAATCAAAGCTACCCTGTTGTGGTTCATTTCTCTGCTTTCTGGTGTGTGCCTTCTATAGTTATGAATCCTTTCTTTCAAGAATTGGCCTCCACCTATCAGAATGCTTTGTTTCTGACATTGGATGTGGATGAGGTTAAGGAAATTGCCTCCAAGTTTGAGATAAAAGCCATGCCTACTTTTGTGTTGCTGAGTGGTGGAGTTCCTGTGGAGAAAATTGTAGGTGCAAATCCAGATGAAATAAGGAAAAGGGTTGATCATTTTATTCACTCAACTCGTTCCTGCAATTATGTTGATCAAACCATGAACGTATGA 450 0.3911 MYSNSTLLKNQQKQKKEMKGQEQIKMSKVIKIDSQKSWEHHIFYATNQSYPVVVHFSAFWCVPSIVMNPFFQELASTYQNALFLTLDVDEVKEIASKFEIKAMPTFVLLSGGVPVEKIVGANPDEIRKRVDHFIHSTRSCNYVDQTMNV* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3110 149 PANTHER THIOREDOXIN 18 138 - -
Lja3g3110 149 SUPERFAMILY Thioredoxin-like 11 135 IPR036249 -
Lja3g3110 149 Pfam Thioredoxin 34 131 IPR013766 -
Lja3g3110 149 Gene3D Glutaredoxin 5 142 - -
Lja3g3110 149 PANTHER THIOREDOXIN 18 138 - -
Lja3g3110 149 MobiDBLite consensus disorder prediction 1 21 - -
Lja3g3110 149 ProSiteProfiles Thioredoxin domain profile. 7 135 IPR013766 -
Lja3g3110 149 CDD TRX_family 51 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3110 Lja-Chr3 59327973 59329592 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3110 K03671 - gmx:100499858 221.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3110 3 59327973 59329592 Lja3g3110 3 59327973 59329592 PCT