Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g3004 ATGGAATCCATAATGTTACATGCTCTGTTCCTGACTCTGTTTCTGTTTTCCCACCAGACAAAAGCAGAGGAATTTGAATCCTTCAGTAATGCCACCAGTTCCAGAGCTAGGAGCCTCGCAGGAACATGTAACTGGTTCCAGGGGAAGTGGGTTTACGATGCTTCATATCCTCTCTATGATCCTTCTTCATGCCCATTCATAGATCAACAGTTCAATTGTCAAAAGCACGGTCGCAAAGATAAACTTTACCAGAAGTATAGGTGGACACCATTTTCTTGTAGTTTGCCAAGGTTCAATGGATTGAGCTTCTTGAACAGAAATAGAGGGAAGAAGATAATGTTTGTCGGTGATTCCTTAAGCTTAAACCAGTTCAACTCATTAGCATGTATGCTTCATGCTTGGGTACCAAAATCCAGGGCCACATTCGCACAGAGGGATGCTCTCTCCTCAGTGAAATTTGAGGACTATGGTCTTGAGTTATATCTGTACCGCACAGCATACTTGGTGGACCTTGACCATGATAAAGTTGGACGTGTTTTGAAGATTGATTCAATCACCAACGGTGACGCTTGGAGAGGAATGGATGCACTGATCTTCAACACGTGGCACTGGTGGACACACACCGGAAGCGCACAACCGTGGGATTATATTCAGGAGAATAATAAATTGTACAAAGACATGAACCGTTTTGTCTTGTTCTACAAAGGGCTAAACACTTGGGCTAGATGGGTTGAAAAGAATGTTAATCCAGCAAAAACCAAAGTCTTCTTTCTAGGAATTTCTCCAGTGCATTACCAGGGAAGAGATTGGAATCAACCAGCAAAGTCATGCATGAGTGAGGCACAACCATTCTTTGGCTTAAAGTACCCTGCCGGAAGACCAATGGCTTGGACGGTGGTGAACAAGGTGTTAACAAGGATGAGTAAGCCAGTGTATTTCTTAGATGTGACCACACTCTCACAGTACAGAAAAGATGCACATCCTGAAGGATACAGTGGGGTCATGGCAACAGATTGTAGCCATTGGTGTCTTCCAGGACTTCCTGATACATGGAATGAGCTTCTGGCTGCAGCTCTTTCTGGTTAA 1086 0.4383 MESIMLHALFLTLFLFSHQTKAEEFESFSNATSSRARSLAGTCNWFQGKWVYDASYPLYDPSSCPFIDQQFNCQKHGRKDKLYQKYRWTPFSCSLPRFNGLSFLNRNRGKKIMFVGDSLSLNQFNSLACMLHAWVPKSRATFAQRDALSSVKFEDYGLELYLYRTAYLVDLDHDKVGRVLKIDSITNGDAWRGMDALIFNTWHWWTHTGSAQPWDYIQENNKLYKDMNRFVLFYKGLNTWARWVEKNVNPAKTKVFFLGISPVHYQGRDWNQPAKSCMSEAQPFFGLKYPAGRPMAWTVVNKVLTRMSKPVYFLDVTTLSQYRKDAHPEGYSGVMATDCSHWCLPGLPDTWNELLAAALSG* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g3004 361 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 95 357 IPR026057 GO:0016740
Lja3g3004 361 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 4 360 - -
Lja3g3004 361 Pfam PMR5 N terminal Domain 42 93 IPR025846 -
Lja3g3004 361 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 4 360 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g3004 Lja-Chr3 55870318 55874241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g3004 - - gmx:100786668 635.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g3004 3 55870318 55874241 Lja3g3004 3 55870318 55874241 ECH
Lja3g3004 3 55870318 55874241 Lja3g3004 3 55870318 55874241 PCT