Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2997 ATGGCGGCGGCTACTTCTTCATCTTGCTCCACAGCGTTCTCCACCCCTTCCCAAACCCTAGCTAAGCCCGCCGCTAAATGCTTCGCCGCCACCAATTTGTCGTTTTCCAAGCCCAGTCTCCGCCCCCTTAGGGCTCAGCGCTGCGTCGCCGTCGGCACCGGCGCGCTCGGTGCTCGTATGGTGTCGGCGGCGCCGGTTGCGTCACCGGCGAAGCTCGATTTCGACACTGCTATCTTCAAGAAGGAGAGGGTTAACCTCGCTGGCCACGATGAGTATATCGTGAAAGGAGGGAGGGATTTGTTCCATTTGTTGCCGGATGCATTCAAGGGTATCAAGCAGATTGGTGTCATCGGATGGGGTTCACAGGGACCTGCTCAGGCACAGAACCTAAGGGACTCCCTTGCTGAAGCAAAGTCTGATATCGTGGTTAAGATCGGACTAAGAAAAGGTTCTAGTTCCTTCAATGAGGCCCGGGGTGCTGGTTTTAGTGAAGAGAATGGAACTCTAGGTGACATATATGAAACTATCTCAGGGAGTGATCTGGTGTTGTTGTTAATTTCTGATTCTGCTCAGGCAGATAATTATGAAAAAATATTTTCTAGCATGAAGCCAAATAGCATACTTGGGCTGTCCCATGGTTTTCTTCTTGGACATTTACAATCACTCGGACTTGATTTTCCTAAGCACTTCAGTGTGATTGCTGTGTGCCCAAAGGGGATGGGTCCATCTGTGAGGAGGCTGTATGTCCAAGGTAAAGAGATAAATGGTGCTGGAATTAATTCAAGTTTTGCGGTCCACCAGGATGTGGATGGCAGGGCCACTGATGTTGCTTTGGGATGGTCTGTTGCTCTTGGATCTCCTTTTACATTTGCCACTACATTAGAGCAGGAATACAAGAGTGACATCTTTGGGGAGCGAGGAATTTTACTTGGTGCTGTTCATGGAATTGTTGAATCCTTGTTTAGGAGGTACACTGAAAATGGAATGGCTGAAGATTTGGCTTATAAGAACACTGTTGAGTCCATAACAGGGATTATATCTAAAACTATCTCAACTAAGGGCATGTTGGCTGTATATAATTCTTTCTCAGAAGAAGGAAAGAGGGAATTTGAGAAAGCATATAGTGCTTCATTCTATCCTTGCATGGACATTTTGTACGAGTGCTATGAGGATGTAGCTAGTGGTAGTGAGATTCGCAGTGTTGTTTTGGCCGGACGTCGCTTTTATGAGAAAGAAGGTCTGCCTGCATTTCCCATGGGTAAAATTGATCAAACCCGGATGTGGAAGGTTGGTGAGCGTGTTCGTTCCACAAGGCCTGCAGGTGATCTAGGCCCTTTGAATCCATTTACTGCTGGTGTCTTTGTGGCATTGATGATGGCCCAGATTGAGGTCCTGAGGAAGAAAGGGCATTCATACTCTGAAATCATCAACGAGAGTGTGATTGAGTCAGTTGACTCTTTGAATCCATTCATGCACGCTCGTGGTGTTTCTTTCATGGTTGATAACTGCTCAACCACTGCAAGGTTGGGTTCAAGGAAATGGGCTCCCCGGTTCGATTACGTCCTGACTCAGCAGGCCTTGGTTGCTGTGGACAATGCAGCACCTATCAACCAGGACCTGATCAGCAACTTCCTGTCAGACCCAGTGCACGGAGCCATTGAGGTTTGTGCAGAGCTTAGACCAACTCTGGACATTTCAGTGCCACCAGATGCAGACTTTGTCCGTCCTGAGTTGCGTCAATCTAGCAATTAG 1752 0.4789 MAAATSSSCSTAFSTPSQTLAKPAAKCFAATNLSFSKPSLRPLRAQRCVAVGTGALGARMVSAAPVASPAKLDFDTAIFKKERVNLAGHDEYIVKGGRDLFHLLPDAFKGIKQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSSSFNEARGAGFSEENGTLGDIYETISGSDLVLLLISDSAQADNYEKIFSSMKPNSILGLSHGFLLGHLQSLGLDFPKHFSVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFTFATTLEQEYKSDIFGERGILLGAVHGIVESLFRRYTENGMAEDLAYKNTVESITGIISKTISTKGMLAVYNSFSEEGKREFEKAYSASFYPCMDILYECYEDVASGSEIRSVVLAGRRFYEKEGLPAFPMGKIDQTRMWKVGERVRSTRPAGDLGPLNPFTAGVFVALMMAQIEVLRKKGHSYSEIINESVIESVDSLNPFMHARGVSFMVDNCSTTARLGSRKWAPRFDYVLTQQALVAVDNAAPINQDLISNFLSDPVHGAIEVCAELRPTLDISVPPDADFVRPELRQSSN* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2997 583 ProSiteProfiles KARI C-terminal domain profile. 293 441 IPR000506 GO:0004455|GO:0009082
Lja3g2997 583 Pfam Acetohydroxy acid isomeroreductase, NADPH-binding domain 112 286 IPR013116 -
Lja3g2997 583 ProSiteProfiles KARI N-terminal domain profile. 94 292 IPR013116 -
Lja3g2997 583 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 295 580 IPR008927 -
Lja3g2997 583 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 72 290 IPR036291 -
Lja3g2997 583 ProSiteProfiles KARI C-terminal domain profile. 442 578 IPR000506 GO:0004455|GO:0009082
Lja3g2997 583 Gene3D - 288 561 IPR013328 GO:0016491
Lja3g2997 583 PANTHER KETOL-ACID REDUCTOISOMERASE 5 582 - -
Lja3g2997 583 PANTHER KETOL-ACID REDUCTOISOMERASE, MITOCHONDRIAL 5 582 IPR013023 GO:0009082|GO:0016491
Lja3g2997 583 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 295 439 IPR000506 GO:0004455|GO:0009082
Lja3g2997 583 Pfam Acetohydroxy acid isomeroreductase, catalytic domain 452 523 IPR000506 GO:0004455|GO:0009082
Lja3g2997 583 PIRSF Ilv5_plant 1 582 IPR016206 GO:0004455
Lja3g2997 583 Gene3D - 60 287 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2997 K00053 - gmx:100812763 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2997 3 55603815 55608188 Lja3g2997 3 55603815 55608188 ECH
Lja3g2997 3 55603815 55608188 Lja3g2997 3 55603815 55608188 PCT