Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2985 ATGCGTCCACCGCAGAGAATGATTGCTTACAACGTCGGCGACAACGTCGAAGTCATCGGTAAGGACGAAGGCTTCTTGGGCTCGTACTACGAGGCCACCGTCATCTCCGTCCTCGCCGACGGCCGCTATGAAGTCCAGTACAAGACGCTGATCGTGGACGAAGAGACCAAGATTCCGCTGAAAGAGACGGTGCTTCCAAAGGACCTCCGCCCTGTGCCGCCGTGTGTCCGGACACGCGGTGGCCACTACGAAATGTACCAGGCTGTGAACGTGTTCGACAACGACGGGTGGTGGTACGGGAAGATCATCGGCTTAACCGGCGTGAAGGGATACTACGTGCACTTCAGCTCTACCAATGAGACGCTTCCGTACCACTGCTCTCGCCTTAGGGTTCACCATGACTTCATTCATGGAGACTGGCATCAAATTAATTGA 435 0.554 MRPPQRMIAYNVGDNVEVIGKDEGFLGSYYEATVISVLADGRYEVQYKTLIVDEETKIPLKETVLPKDLRPVPPCVRTRGGHYEMYQAVNVFDNDGWWYGKIIGLTGVKGYYVHFSSTNETLPYHCSRLRVHHDFIHGDWHQIN* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2985 144 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 8 142 - -
Lja3g2985 144 CDD TUDOR 27 71 IPR002999 -
Lja3g2985 144 Pfam Agenet domain 13 74 IPR008395 -
Lja3g2985 144 Gene3D - 5 73 - -
Lja3g2985 144 PANTHER - 8 142 - -
Lja3g2985 144 SMART agenet_At_2 8 77 IPR014002 -
Lja3g2985 144 SMART agenet_At_2 81 137 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2985 Lja-Chr3 55180878 55181697 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2985 - - lja:Lj0g3v0283899.1 183.726