Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2984 ATGTTGTCCGGAATACGTACTCCTCCGCCCAGACCAGTGGTTTACAACGTGGGCGACAAAGTCGAAGTGATTGGAAAGGAGGAAGGTTACGTGGGTTCATACTACAACGCCACCATTCTCTCTGTCCTCGAAGATGACCGCTATAAGGTTCAGTATGAGAGCTTCATTGAGGATGAGGAGACTCAAACTCCTCTGAAGGATACTCTGTTGAAGAAGGACATTCGCCCGAAGCCGCCTCGCGTTCGCACTGGCAGCGAGTTCAAGCCAGGGCAGAATGTGGACGCGTACGACCATAGAGGGTGGTGGAATGGGAAGATCATCGGCGATATTGAGGGCGTGTGGGGCCACTACTGCGTGTACTACGAATCCAGCAATGAGTATGTTGAGTATAGCGCTTCTCGCATAAGGGTTCACCATGAGTTTGTTGATGGGCATTGGTTGCAAGCGATCCTCTAG 456 0.5154 MLSGIRTPPPRPVVYNVGDKVEVIGKEEGYVGSYYNATILSVLEDDRYKVQYESFIEDEETQTPLKDTLLKKDIRPKPPRVRTGSEFKPGQNVDAYDHRGWWNGKIIGDIEGVWGHYCVYYESSNEYVEYSASRIRVHHEFVDGHWLQAIL* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2984 151 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 12 149 - -
Lja3g2984 151 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 12 149 - -
Lja3g2984 151 Pfam Agenet domain 18 79 IPR008395 -
Lja3g2984 151 Gene3D - 5 87 - -
Lja3g2984 151 SMART agenet_At_2 85 143 IPR014002 -
Lja3g2984 151 SMART agenet_At_2 13 82 IPR014002 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2984 Lja-Chr3 55097328 55097783 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2984 - - lja:Lj0g3v0200589.1 306.99