Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2972 ATGAGTAACGCTGCTGAAACCACCGTCAGGCACTTGCCGGAGGAGATCCTGTTGAAGGTGTTCTCCGGGGTTAGTGATACCCGGACGCGGAACTCGCTCTCGCTTGTTTGCCGGAGCTTCTACTGCTTCGAGCGCAGGACGCGCTCCTCCCTCACGCTCCGGGGAATCGCGCGTGACCTCTACTTGATCCCGACCTGCTTCGCGCACGTCACGCACCTCGACTTGTCGCTCCTCTCGCCGTGGGGCCACGCGCTGCTCTGCTCGTCCTCCACCGCCGACCCTCACCACCTTGCCCAACGCCTCCGCGACGCCTTCCCGCGCGTGACCTCGCTCGTCGTCTACGCGCGCGAACCGACCACGCTCCACCTTCTCCTGCTCTCTCCCTGGCCGGAGCTCCGCCATGTTCGCCTTGTCCGATGGCACCAGCGCCCGCCGTCGTCGCCAGCTGGATCTGACTTCGCGACTTTGTTCTCGCGCTGCCGATCGCTCACCTCGCTGGATCTCTCCGCCTTCTACCACTGGCCGGAGGATCTCCCGCCTGTCCTGACAGCGAACCCCGCCGCCGCCGCATCTCTACGGCGGCTGAACCTCCTAAAGACGTCGTTCACGGAGGGCTTCAAGTCTCACGAAATCGAATCCATCACCGCATCTTGCCCTAACCTGGAGCACTTTCTCGTGGCCTGCACTTTCGATCCGAGATACATAGGGTTCGTCGGTGACGAGACGCTGTCGGCGATCCCTTCCAATTGCCCCAAGCTCTCGCTCCTTCACCTTGCTGATACGTCATCGTTTTCGAACCGGAGCGACGATGACGGTAACGGCGGGGAGGACGCGAGGATTAGCCACGAGACGCTGGTGGCGTTGTTCTCCGGGCTTCCCCTTTTGGAAGAGCTGGTGCTAGATGTTTGTAAAAATGTCAGAGAGAGTAGTTTTGCTATGGAGGTTTTGAGTAAGAAGTGTCCCAATTTGAGGGTTCTCAGGTTGGGTCAGTTTCAGGGGATTTGCTTGGCCATTGGGTCAAAGCTCGATGGAATTGCCCTTTGCCAAGGGCTTCGATCCTTGTCCATTCATGGCTGTGCGGACCTCGATGACATGGGGTTGATTGAGATTGCAAGAGGTTGTTCCAGGTTGGTTCAGTTTGAGCTTCAGGGCTGCAAGCTTGTCACGGAGAAAGGGTTGGGGACCATGGCTTGCTTGCTTCGTAAGACTCTTGTGGATGTCAAGGTTTCTTGCTGTGTCAATCTCGACACCGCGGCGGCACTCAGAGCTCTGGACCCTATCCGGGACCGGATTGAGCGGCTTCATGTGGATTGCGTGTGGAATGGCTTGAAGGACAGTGATGACAACATGGGAGGTGGTCTTCTCAATTTTGACCTGAATGACCCCAATGGTGGTGCTGAAATCATGGATTGCTTTGGGGATGAGGAATGTGAAGACCCAAGCAAAAGGAAGAGGCAGAGATGCGAGTATGGACTAGAGGGTGATGATTCCTTGGTGCAAAGCAATGGCAATGGTTACTATGGCAAGAACTGGGACAGGCTGCGTTATCTCTCTCTTTGGATAAAGGTTGGTGATCTTCTGAATCTCTTACCGGTGGCAGGGTTGGAGGATTGCCCTAACCTGGAAGAGATTCGTGTGAAGGTTGAAGGAGATTGCAGGGGGCAGCCAAAACCAGCTGAGAGTGAATTTGGTCTCAGCATCCTGGCTTGTTATCCACAGCTATCAAAGATGCAGCTGGATTGTGGTGATACAAGAGGCTATGTGCTCACAGCGCCTTCAGGGCAGATGGATCTGAGCTTGTGGGAGAGGTTTTTTCTCAATGGGATTAGTAGTTTGAGTCTGAATGAGCTTCATTACTGGCCACCACAAGATGAGGACGTAAACCTGAGGAGTGTTTCACTTCCAGCTGCCGGCTTACTTCAAGAATGTTACACCCTGAGGAAGCTTATCATTCATGGGACAGCTCATGAACATTTCATGAATTTTTTCCTCAAGATCCCAAACCTGAGGGATGTGCAGCTGCGAGAGGATTATTATCCAGCACCGGCAAGTGACATGAGCACGGAGATCAGGGTGGGTTCATGCAGCCGCTTTGAAGATGCATTAAACAGGCGTCATATCTGTGATTGA 2130 0.5465 MSNAAETTVRHLPEEILLKVFSGVSDTRTRNSLSLVCRSFYCFERRTRSSLTLRGIARDLYLIPTCFAHVTHLDLSLLSPWGHALLCSSSTADPHHLAQRLRDAFPRVTSLVVYAREPTTLHLLLLSPWPELRHVRLVRWHQRPPSSPAGSDFATLFSRCRSLTSLDLSAFYHWPEDLPPVLTANPAAAASLRRLNLLKTSFTEGFKSHEIESITASCPNLEHFLVACTFDPRYIGFVGDETLSAIPSNCPKLSLLHLADTSSFSNRSDDDGNGGEDARISHETLVALFSGLPLLEELVLDVCKNVRESSFAMEVLSKKCPNLRVLRLGQFQGICLAIGSKLDGIALCQGLRSLSIHGCADLDDMGLIEIARGCSRLVQFELQGCKLVTEKGLGTMACLLRKTLVDVKVSCCVNLDTAAALRALDPIRDRIERLHVDCVWNGLKDSDDNMGGGLLNFDLNDPNGGAEIMDCFGDEECEDPSKRKRQRCEYGLEGDDSLVQSNGNGYYGKNWDRLRYLSLWIKVGDLLNLLPVAGLEDCPNLEEIRVKVEGDCRGQPKPAESEFGLSILACYPQLSKMQLDCGDTRGYVLTAPSGQMDLSLWERFFLNGISSLSLNELHYWPPQDEDVNLRSVSLPAAGLLQECYTLRKLIIHGTAHEHFMNFFLKIPNLRDVQLREDYYPAPASDMSTEIRVGSCSRFEDALNRRHICD* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2972 709 Gene3D Ribonuclease Inhibitor 27 450 IPR032675 -
Lja3g2972 709 PANTHER F-BOX PROTEIN MAX2 6 684 - -
Lja3g2972 709 SUPERFAMILY RNI-like 70 390 - -
Lja3g2972 709 SMART fbox_2 12 53 IPR001810 GO:0005515
Lja3g2972 709 SUPERFAMILY F-box domain 8 43 IPR036047 GO:0005515
Lja3g2972 709 Pfam F-box 11 49 IPR041567 -
Lja3g2972 709 PANTHER UNCHARACTERIZED 6 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2972 Lja-Chr3 54619521 54621650 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2972 - - gmx:100807914 1116.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2972 3 54619521 54621650 Lja3g2972 3 54619521 54621650 ECH