Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2965 ATGGCCGCGGCCGCCGCCACCACCACCGCCACAGCCGCAACTGAACCAACATGGCCAGAACTGCTAGGCAGCAACAACTGGGAAACCCTCCTAGACCCACTAAACCTCCACCTCCGCAACCTCATCCTCCGGTGCGGCGACCTCATCCAAGCCACCTACGACGCCTTCAACAACGACCAAAACTCCCTCTACTGCGGCTACAGCCGCTATGGCAAATCCTCATTCTTCAACAAGGTCATGTTCTACCCCAACCCTGAACACTTCACTGTCCCTTCCTTCCTCTACGCCACCGCACGTGTCAGCGTCCCTGAAGGTTTCATCCTCCACTCCTTGTCACGTGAGAAGCGGGACCGCGAGTCCAACTGGATCGGCTACATCGCCGTCACCTCCGATGGCCGCGCTAAGGAGCTGGGCCGCCGTGAGATCTACGTTGTGTGGCGCGGCACCACCAGGGACTTGGAGTGGATCAACGTGCTTGGGGCTGCTCCTCAGTCTGCTACCGGCTTGTTGAGTGCTGAAAGTCTCGGCCAGTTGAAAAACGACGGTAGCAGCAGTAGCAGTGACGAAGATGACGAACATACACCGAAAGTGATGAGGGGTTGGCTCACAATCTACACCTCAGATGACCCAGACTCTCCTTTCACAAAAAACAGTGCTAGAACGCAGGTTTTGACCAAGGTCAAAGAGTTATTACACCTTTACAAGGATGAAAACCCGAGCGTAGTGTTGGTGGGACACAGCCTCGGTGCAAGCTTATCGATTGTAAGCGCTTTCGATTTGGTGGAGAACGGAGTCACAAACGTGCCAGTTGCCGCTTTCGTGTTCGGGTCCCCCCAAGTAGGAAACAAGGCCTTTAACGAGAGGTTCAAAAAGTTTCCTAACCTAAAGGTTTTGCACGTGAGGAATGTGATTGATCTCATAACTCGTTATCCGGGGAGATTGTTGGGATATGAGAACACGGGCGTGGAGTTAGTGATTGATACGCGAAAGTCACCGAGCTTGAAGGACTCAAAGACCCCGGGTGATTGGCATAACTTGCAGGCCATGTTGCATGTGGTGGCAGGGTGGAACGGGAAGAAAGGGGGGTTTGAGATGAAGGTGAAGAGGAGCTTGGCGTTGGTGAACAAGTCGTGTGAATTCTTAAAGGATGAGTATCATGTGCCCGGGTCGTGGTGGGTGGAGAAGAACAAAAGTATGGTGCGTAAGGAAGATGGAGAGTGGGTTATGGGTGCAGCTGATGAGGAGGATATTCCAGTGCCTGAAGATTGA 1269 0.5335 MAAAAATTTATAATEPTWPELLGSNNWETLLDPLNLHLRNLILRCGDLIQATYDAFNNDQNSLYCGYSRYGKSSFFNKVMFYPNPEHFTVPSFLYATARVSVPEGFILHSLSREKRDRESNWIGYIAVTSDGRAKELGRREIYVVWRGTTRDLEWINVLGAAPQSATGLLSAESLGQLKNDGSSSSSDEDDEHTPKVMRGWLTIYTSDDPDSPFTKNSARTQVLTKVKELLHLYKDENPSVVLVGHSLGASLSIVSAFDLVENGVTNVPVAAFVFGSPQVGNKAFNERFKKFPNLKVLHVRNVIDLITRYPGRLLGYENTGVELVIDTRKSPSLKDSKTPGDWHNLQAMLHVVAGWNGKKGGFEMKVKRSLALVNKSCEFLKDEYHVPGSWWVEKNKSMVRKEDGEWVMGAADEEDIPVPED* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2965 422 Pfam Lipase (class 3) 143 313 IPR002921 GO:0006629
Lja3g2965 422 PANTHER PHOSPHOLIPASE A1-IIDELTA 14 420 - -
Lja3g2965 422 SUPERFAMILY alpha/beta-Hydrolases 117 335 IPR029058 -
Lja3g2965 422 PANTHER PHOSPHOLIPASE A1-IIGAMMA 14 420 IPR033556 GO:0008970
Lja3g2965 422 CDD Lipase_3 83 327 - -
Lja3g2965 422 Gene3D alpha/beta hydrolase 17 419 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2965 Lja-Chr3 54362624 54366936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2965 12 421 Acyl Lipid Metabolism Gene Families AT2G42690 64.010 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2965 - - aprc:113857901 650.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2965 3 54362624 54366936 Lja3g2965 3 54362624 54366936 ECH