Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2963 ATGGCTGTGGTCGATGTTATCAAATCTTGCCTCGACTCCATTAGACAGATATCAGAGGATATTGAAGGTTCTATTGTGTATTTAGATGCTGGATCTACAGAGAGCTTCCAATTTATTGGGGCATATCCTGTACTTCTAGATCTTGGAGCACGAGCTATTTGCAGTTTGGAAAACATGTCTGCACTTGATGCGGTGGTTGATTGGAATTCATACTCTGATCATGCAAGGAAACTTGTGGTTATCACATCCCGTCTACTAAGTGATGCACATCGATATATTTTACGTTGCCTGAGCTCACATCAAGCTGTTCATCGTTGCATTATATTTACATCTATCTCAGAGATGGCTCACGCAGCATTTCCTGATTCGCCACTGGGACCAGATGCATATAATGAATATGAATCCTTGCTGGTTCAAGATTATGAAGAACTCATTAAGAAACCGGGGAAAAATCTAGGGCAGATTGGTAGTCTCTTACAGGCAAGATTTAACCTTGAAGATGGAGGAGGTTTGCAGTTTCCTCCCAGTCAAGAGAATGTTTCTCATCTTGAAGCTAGTTCGAGTGGAAGGGATTTTTACGAACAAAATCCATTAGACTACATTGAAGATGCTGGGCAGAAATTAGTTGTTTCAGTTCATCATTTTCCCATGATTTTATGTCCCATTTCACCAAGAGCATTTGTTCTACCTTCTGAAGGATTAGTGGCTGAAACATTCTTATCAGCTGAACATGAAGATTCCATCGGTCCTGGTTTGCCTCCCTTGAGTACTGGCTTGCTATCTGATGCTGATGATGTGCCTCCAGGTGCAACTCTTACAGCACACTTTCTCTATCATTTGGCAGCCAAGATGGACTTGAAGATGGAAATTTTCTCCATTGGTGATATGTCGAAAACTGTTGGAAAATTTCTGACAGACATGTCAAGTCTTTATGACGTTGGCCGTCGTAAGCGATCAGCGGGGTTGTTACTCATTGATCGCACACTCGATCTTCTCACTCCTTGCTGTCATGGAGACTCACTTGTTGACCGTATCTTTTCTTCTTTGCCCCGTAGAAATAGAACAACTACCCATGCCCAAGGTAAAGGTTCAGGAAACCAGTTAAAACCTGGCTCTTCCCATCTGCAACGTGCTCCTTTAGATGTTCAGATACCACTTGCAAAGATCCTTAATGAAGAAAATTGGAAAATAGACAATTTTCGGCTTTTAGAAAGTATTGAAGCTTTTATGTGTGGGTGGAATTCTGGTAACTCTGATTCGCAGATTGCAGGTTTGATTAATCTTAGTCAGAAGATTCATGACAAGCCTAGTCCCTCTGATGTAGAGATACTTACGGGGTCTTTTGTCTCCTCTGAATGTTTTCGTGGAATACCATTCCTGGAAGCCATAATAGATAGAAGAACAAAAGATGGGGCCTTATTGGTAAAGAAATGGCTACAAGAAACTTTGCGCAAGGAAAATGTCACTGTGAATGTGAAATCTCGTCCTGGTCTTGTTACCAAGCCAGAATTGCAAGCTATGATCAAAGCATTATCCAGCAGACAATCATCTTTGCTAAGGAACAAAGGAATTATTCAATTAGCTTCAGCCACATTATTTGCTCTTGAGGAATCAAATACTGCGAAATGGGATGCATTTAGCAGTGCCGTGAAAATTCTGAGTGTAAGTTCAGGAGAAACCAGTCAAAGTCTCGCCGCTCAAATTTGTGATCTCATCAATAAGAGTGCTCTGTTGGGATCACAGGTAAATAAAGGGAAAGGGGAGATCTCAAAGGGGTTGATTTCTTTGCAAGATGCTTTGCTGTTAATGATCATTGGATATATTTTGGCTGGTGAGAATTTTCCAACATCTGGTTCCGATGGGCCGTTTTCTTGGCAAGAGGAACATTTGTTAAAAGAAGCTGTTGTAGATGCCATTCTTGAAAATCCATCTGCAGTAAACCTCAAGTTTCTAGATGGGCTGAGGGAAGAGCTTGAAACTAATGCAAGGAAGTCAAAATCAGAGGAATCTACTGAAGCCCCGTCAAAACTGGACATTGATGATTTTGATGATGACCAGTGGGGAAAATGGGGTGATGAAGATGGGGATGATGACAACAAAAATGAACAAGTTTTTGGTGATATGCAACTTAAGTTGGAGTTGCGGGATCGGGTGGATAACTTTTTCAAATTTCTTCACAAGTTATCTGATCTAAAAAGAAGAAATCTACCGCTGAGGGATGGATCATTGTCTGTGGAAAGCAATTTTGACGAAGATACCTATGTGGGAAAAGGGTTAGTTTATAAGCTACTAACAAGGGTATTGGGCAAATATGATGTGCCTGGGTTAGAATATCATTCTTCCACCGTGGGGCGCTTGTTTAAGAGTGGATTTGGGAGATTTGGCCTTGGTCAGGCTAAACCAAGTCTTGCCGATCAAAATGTCATTTTGGTGTTTGTCATTGGGGGTATTAATGGACTTGAGGTGCGTGAAGCTCAGGAGGCGTTGGCTGAAAGTGGAAGACCTGACATAGAGTTGCTTGTTGGTGGAACAACTCTCCTTACTCCTGGTGACATGCTCGATTTACTGCTAGGGGACTTGAGTTACTTTTAA 2592 0.4155 MAVVDVIKSCLDSIRQISEDIEGSIVYLDAGSTESFQFIGAYPVLLDLGARAICSLENMSALDAVVDWNSYSDHARKLVVITSRLLSDAHRYILRCLSSHQAVHRCIIFTSISEMAHAAFPDSPLGPDAYNEYESLLVQDYEELIKKPGKNLGQIGSLLQARFNLEDGGGLQFPPSQENVSHLEASSSGRDFYEQNPLDYIEDAGQKLVVSVHHFPMILCPISPRAFVLPSEGLVAETFLSAEHEDSIGPGLPPLSTGLLSDADDVPPGATLTAHFLYHLAAKMDLKMEIFSIGDMSKTVGKFLTDMSSLYDVGRRKRSAGLLLIDRTLDLLTPCCHGDSLVDRIFSSLPRRNRTTTHAQGKGSGNQLKPGSSHLQRAPLDVQIPLAKILNEENWKIDNFRLLESIEAFMCGWNSGNSDSQIAGLINLSQKIHDKPSPSDVEILTGSFVSSECFRGIPFLEAIIDRRTKDGALLVKKWLQETLRKENVTVNVKSRPGLVTKPELQAMIKALSSRQSSLLRNKGIIQLASATLFALEESNTAKWDAFSSAVKILSVSSGETSQSLAAQICDLINKSALLGSQVNKGKGEISKGLISLQDALLLMIIGYILAGENFPTSGSDGPFSWQEEHLLKEAVVDAILENPSAVNLKFLDGLREELETNARKSKSEESTEAPSKLDIDDFDDDQWGKWGDEDGDDDNKNEQVFGDMQLKLELRDRVDNFFKFLHKLSDLKRRNLPLRDGSLSVESNFDEDTYVGKGLVYKLLTRVLGKYDVPGLEYHSSTVGRLFKSGFGRFGLGQAKPSLADQNVILVFVIGGINGLEVREAQEALAESGRPDIELLVGGTTLLTPGDMLDLLLGDLSYF* 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2963 863 PANTHER SEC1 FAMILY DOMAIN-CONTAINING PROTEIN MIP3 3 862 - -
Lja3g2963 863 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 3 862 IPR001619 GO:0016192
Lja3g2963 863 Gene3D - 252 340 IPR027482 -
Lja3g2963 863 SUPERFAMILY Sec1/munc18-like (SM) proteins 776 857 IPR036045 -
Lja3g2963 863 MobiDBLite consensus disorder prediction 661 702 - -
Lja3g2963 863 Gene3D - 751 858 IPR027482 -
Lja3g2963 863 MobiDBLite consensus disorder prediction 661 684 - -
Lja3g2963 863 MobiDBLite consensus disorder prediction 352 373 - -
Lja3g2963 863 SUPERFAMILY Sec1/munc18-like (SM) proteins 198 338 IPR036045 -
Lja3g2963 863 Coils Coil 648 668 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2963 - - gmx:100804041 1355.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2963 3 54260144 54267013 Lja3g2963 3 54260144 54267013 ECH