Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2951 ATGGCTTCTTCCACTAGACAAAAGCAGTACATATTAGCTCTCTTCCTTCTTCTTGCAGTTGGGATTTCCCGGGTAATCTCCCGCGAGCTGCACGAGACCGAGACATCCTTAATAGAAAGACACGAGCAATGGATGGCAAAATATGACAAAGTGTATAAGGATGCGGCTGAGAAGGAAAAACGTTTCTTGATATTCAAGGACAATGTGGAGTTCATTGAATCATTCAATGCTGCTGGAAACAAACCTTACAAGCTCGGCGTTAATCACCTTGCTGATTTAACAATTGAGGAGTTCAAGGCTTCGCGTAACGGATTGAAGAGGTCCTATGACTATGAGGTTGGGACAACATCATTTAAGTATGAAAATGTGACTGCTATTCCTGCAAGTGTAGACTGGAGGAAAAAAGGAGCTGTTACTCCAATCAAGGACCAAGGTCAATGTGGGAGTTGCTGGGCATTTTCAACCGTGGCCGCAACCGAGGGTATCCACAAAATCTCTACTGGAAAGTTGGTCTCTCTATCAGAACAAGAGCTAGTGGATTGTGACAGAAAAGGTACAGACCAAGGCTGTGAAGGAGGATACATGGAAGATGGCTTTGAGTTCATTATAAAAAATGGTGGAATTACCACTGAGGCTAATTACCCCTATAAGGCAGTTGATGGGAGTTGTAAAAATGCAACTGCACCTGCAGCTCAAATTAAAGGGTATGAGAAAGTCCCAGTTAATAGCGAGAAGGCACTCTTGAAAGCGGTTGCTAACCAACCTGTGTCAGTTTCAATTGATGCAGCTGATGGAAGTTTCATGTTTTACTCAAGTGGGATATTTACAGGAGAATGTGGAACTGAGCTAGACCATGGTGTTACAGCAGTTGGTTATGGAAGAGCTAATGGTACTGATTATTGGATAGTGAAGAATTCATGGGGTACAGTGTGGGGTGAGCAAGGATACATAAGGATGCAGCGAGGCATAGCTGCAAAGGAAGGTTTATGTGGAATTGCTATGGATTCCTCTTATCCAACTGCTTAA 1026 0.4327 MASSTRQKQYILALFLLLAVGISRVISRELHETETSLIERHEQWMAKYDKVYKDAAEKEKRFLIFKDNVEFIESFNAAGNKPYKLGVNHLADLTIEEFKASRNGLKRSYDYEVGTTSFKYENVTAIPASVDWRKKGAVTPIKDQGQCGSCWAFSTVAATEGIHKISTGKLVSLSEQELVDCDRKGTDQGCEGGYMEDGFEFIIKNGGITTEANYPYKAVDGSCKNATAPAAQIKGYEKVPVNSEKALLKAVANQPVSVSIDAADGSFMFYSSGIFTGECGTELDHGVTAVGYGRANGTDYWIVKNSWGTVWGEQGYIRMQRGIAAKEGLCGIAMDSSYPTA* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2951 341 SMART Inhibitor_I29_2 41 98 IPR013201 -
Lja3g2951 341 SUPERFAMILY Cysteine proteinases 33 340 IPR038765 -
Lja3g2951 341 Pfam Cathepsin propeptide inhibitor domain (I29) 41 98 IPR013201 -
Lja3g2951 341 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 300 319 IPR025661 -
Lja3g2951 341 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 283 293 IPR025660 -
Lja3g2951 341 Pfam Papain family cysteine protease 126 339 IPR000668 GO:0006508|GO:0008234
Lja3g2951 341 Gene3D Cysteine proteinases 21 341 - -
Lja3g2951 341 PRINTS Papain cysteine protease (C1) family signature 144 159 IPR000668 GO:0006508|GO:0008234
Lja3g2951 341 PRINTS Papain cysteine protease (C1) family signature 285 295 IPR000668 GO:0006508|GO:0008234
Lja3g2951 341 PRINTS Papain cysteine protease (C1) family signature 300 306 IPR000668 GO:0006508|GO:0008234
Lja3g2951 341 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 30 340 - -
Lja3g2951 341 CDD Peptidase_C1A 127 339 IPR039417 -
Lja3g2951 341 SMART pept_c1 126 340 IPR000668 GO:0006508|GO:0008234
Lja3g2951 341 PANTHER SENESCENCE-ASSOCIATED GENE 12 30 340 - -
Lja3g2951 341 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 144 155 IPR000169 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2951 Lja-Chr3 53625135 53626567 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2951 - - gmx:100818606 579.711