Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2902 ATGGCTTCTCACACCAACCTCGACGACGATCAGCTTCTGGTGGAGCGTAAATTATCTGCTAGGGTTTTGACACTCAACAGGCCAAAGCAGTTGAATGCCCTCTCTTATTATATGGTATCTCGGCTACTTGAAAGTTTTCAAGGCGATGAGGGGAATTCTGATATTAAATTGATTGTTGTGAAGGGAAATGGAAGGGCATTTTGTGCTGGTGGTGATGTTGCAGCGGTTGTTCGTGCTGCGAGAGATGGTGATTGGAGGTATGGTGCAAAATTTTTTGGTAATGAATATAAAATGAATTACTTGATGGCAACATATAGTAAACCTCAGGTTTCAATTCTCAATGGAATTGTCATGGGAGGTGGTGCTGGTGTTTCTATACATGGAAGATTTCGAGTTGTTACAGAGAATACAGTCTTTGCTATGCCAGAAACAGCTTTGGGTTTATTTCCTGATGTAGGTGCTGCATATTTCTTGTCTAGACTGGCTGGATTTTTTGGTGAATATGTTGGTCTTACAGGAGCTAGGTTGGATGGTGCTGAAATGCTTGCTTGTGGTCTTGCAACACATTTTGTCCCTTCACCGAAATTGTCTCTATTAGAAGAATCATTATGTAAGGTGGGAACTAGCGATCCAACTGCAGTATCGGCAATTATCAATACGTACTCGGAGCAGCCATTCTTGAAAGAGGATAGTGTTTTTAACAGGATGAATGCCATCAATAAGTTTTTCTCAAGAAAAACAGTCGAGGAAATATTATCTTCTCTTGAGATGGAAGCTGAGAGTAAGACTGACAATTGGATTTCTGCAACACTTCAAACCTTAAAGAAAGCATCACCAACAAGCCTTAAAATCTTTCTTAGATTGATTAGAGAATGCAGACTCCTAGGAGTTGGTCAATGTCTTGTTTATGAGTATAGAATTGTTTGTCATATTCTAAAAGGACACTACAGCAAGGATTTCTTTGAGGGTTGTAGAGCTATACTGATAGATAAGGACAGGAACCCAAAGTGGGAGCCTTCCAAATTGGAGCTTGTAAGTGATCGTGATGTTGATCGTTACTTCTCTAAGCTTGATGTTAAAGGATGGGAAGATTTGGAGCTTCCTAAAAGGTTCAACAATCTTCCTGCCTATGCTATTTCAAAGCTTTAA 1149 0.3995 MASHTNLDDDQLLVERKLSARVLTLNRPKQLNALSYYMVSRLLESFQGDEGNSDIKLIVVKGNGRAFCAGGDVAAVVRAARDGDWRYGAKFFGNEYKMNYLMATYSKPQVSILNGIVMGGGAGVSIHGRFRVVTENTVFAMPETALGLFPDVGAAYFLSRLAGFFGEYVGLTGARLDGAEMLACGLATHFVPSPKLSLLEESLCKVGTSDPTAVSAIINTYSEQPFLKEDSVFNRMNAINKFFSRKTVEEILSSLEMEAESKTDNWISATLQTLKKASPTSLKIFLRLIRECRLLGVGQCLVYEYRIVCHILKGHYSKDFFEGCRAILIDKDRNPKWEPSKLELVSDRDVDRYFSKLDVKGWEDLELPKRFNNLPAYAISKL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2902 382 SUPERFAMILY ClpP/crotonase 10 340 IPR029045 -
Lja3g2902 382 Gene3D - 7 370 - -
Lja3g2902 382 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 8 382 IPR032259 GO:0003860
Lja3g2902 382 Pfam Enoyl-CoA hydratase/isomerase 21 354 IPR045004 -
Lja3g2902 382 CDD crotonase-like 12 196 - -
Lja3g2902 382 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE 1 8 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2902 Lja-Chr3 49654174 49668777 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2902 1 382 Miscellaneous Gene Families AT5G65940 65.707 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2902 K05605 - gmx:100170729 605.905