Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2901 ATGAATGGGTTCAAACCAGAATTGGTGCCGGTCCACAGAGAATTAGTTAAAGAGTTTGCTGTTTGTGACCGTTGGTTCGCTTCGATTCCCACGTCGACTCAGCCAAACCGGCTTTATGTGCATTCTGCTACGTCCCATGGTTTGAGCAGCAATGACACAAAGAAACTCGTTGGAGGGTTGCCCCAGAAGACCATATTCGACTCTCTGCACGAAAATGGGTTCAACTTTGGTATCTATTATCAACAATTACCATCCACTATTTTATACAGGAGTCTAAGGAAGTTGAAACACTTAGATAACTTCCACCCGTTCGACTTAACCTTCAAGAAGCATTGCAAAGAAGGGAAATTGCCAAACTATGTGGTGATTGAACAAAGAACTATGGATCTGTTATCAGTAGCAGCGAATGATGATCATCCATCTCATGATATTGCAGAAGGACAAAAATTTATAAAAGAAGTTTATGAAGCACTCAGAGCTAGCCCTCAATGGAATGAGATCTTGTTTGTGATCATATACGACGAGCATGGAGGCTTCTACGATCATGTTCCTACACCCGTTGATGGAGTGCCTAATCCAGATGACATTGTAGGTCCTGAGCCATTCAAGTTCAAGTTTGATAGACTTGGTGTTAGGGTTCCGGCCATCATTATTTCTCCATGGATTGAGCCAGGAAAAGTGTTGCACGAGCCTTCTGGACCATTCCCAACATCACAGTATGAGCATTCCTCTATTCCAGCAACTGTTAAGAAAATATTCAATCTTCCTAAGTTCTTGACAAAGCGAGATGCATGGGCTGCAACATTTGAGGGCCTTTTAACTCGAAGCAGCCCACGTACTGATTGTCCAGAGACATTGCCTAACCCAATAAAACTACGGGAGGCAGCAGCTAATGAAGAGGCCAAGTTGACTGAATTTCAAGTAGAACTGGTACAATTGGCAGCAACTTTGAATGGGGATCATAAAAAAAGTACATACCCCAAGAAGCTAACTGAGAGCATGAGTGTTTCAGACGCAGCAAAATATGTTGAAGATGCATTCAAGACATTCTCAGATGAAAGTGAGAAAGCCAAACAAAATGGAGTTGATGAATCTGAAATTGTCCATTGTGCTGATTGTGCTAGTGCTAGTGCACATGCACCACCTGGTACCGGAAACTTCTTTGACAAGGTGTTTTCTTGTATAACTTGTAATCGCTGA 1200 0.4242 MNGFKPELVPVHRELVKEFAVCDRWFASIPTSTQPNRLYVHSATSHGLSSNDTKKLVGGLPQKTIFDSLHENGFNFGIYYQQLPSTILYRSLRKLKHLDNFHPFDLTFKKHCKEGKLPNYVVIEQRTMDLLSVAANDDHPSHDIAEGQKFIKEVYEALRASPQWNEILFVIIYDEHGGFYDHVPTPVDGVPNPDDIVGPEPFKFKFDRLGVRVPAIIISPWIEPGKVLHEPSGPFPTSQYEHSSIPATVKKIFNLPKFLTKRDAWAATFEGLLTRSSPRTDCPETLPNPIKLREAAANEEAKLTEFQVELVQLAATLNGDHKKSTYPKKLTESMSVSDAAKYVEDAFKTFSDESEKAKQNGVDESEIVHCADCASASAHAPPGTGNFFDKVFSCITCNR* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2901 399 PANTHER NON-SPECIFIC PHOSPHOLIPASE C4-RELATED 1 379 IPR007312 GO:0016788
Lja3g2901 399 PANTHER NON-SPECIFIC PHOSPHOLIPASE C3 1 379 - -
Lja3g2901 399 Pfam Phosphoesterase family 1 256 IPR007312 GO:0016788
Lja3g2901 399 SUPERFAMILY Alkaline phosphatase-like 26 231 IPR017850 -
Lja3g2901 399 Gene3D Alkaline Phosphatase, subunit A 121 302 IPR017850 -
Lja3g2901 399 Gene3D Alkaline Phosphatase, subunit A 1 60 IPR017850 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2901 Lja-Chr3 49645660 49652005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2901 1 395 Acyl Lipid Metabolism Gene Families AT3G03530 63.814 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2901 K01114 - lja:Lj0g3v0198969.1 814.298