Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2899 ATGGCTTGCTCAACCGCTACACTCCCTTCGGCTTTCACCCAATTCCAGAGTCTTCCACCGCGTCACGTTTTCATCCCCAAACTCCGTATCAGAATCGCCTCCGTGTCGAAACAACGGAGATTCAATTGTAAGCGCGTTGAAGTGAAAGCTGTTTCAACTGATCTTCAAAATGGTGCTATCAGTGGTGAAGTGAATGAAACTGGAAGTTCGGAGTTGAAGAAGGATAGGCAAACTAATCAATCATCCTCAAAATTGGTCCTCGTTGTTGGTGGCTCAGGAGGTGTTGGGCAGCTAGTAGTAGCATCACTGCTTCAGCGGAACATCAAGTCACGCTTGATACTCCGGAATCCTGAGAGAGCCACGGCACTGTTTGGGGATCAAGATAAGGAGACATTGCAGGTAGTCAAAGCTGACACGCGGAAGCAGGAAGATTTGGATCCTTCCATATTCGAGGGAGTCACACATGTGATTTGCACCTCAGGAACAACAGCTTTTCCTTCCAAGCGGTGGGAAGATGACAATACACCAGAAAGGGTTGATTGGGTGGGAGTGAAGAATCTAGTATCTGCATTGCCTTCCTCAGTGAAGAGAGTTGTTCTGGTGTCATCAATAGGTGTGACCAAGTATAATGAATTGCCATGGAGCATTATGAACCTATTTGGCGTCCTGAAGTATAAGAAGATGGGGGAGGATTTTCTTCAGAATTCTGGCATTCCATTTACCATAATAAGGCCCGGAAGGCTGACAGATGGACCATACACTTCATATGATCTCAATACTTTACTCAAAGCGACAGCTGGACAACGACGCGCAGTCCTTATAGGTCAAGGAGATAAACTAGTGGGAGAGGCGAGCAGAATTGTGGTTGCTGAAGCTTGCATACAGGCACTAGATCTACAAGTCACTGAAAACCAAGTATATGAAGTTAGCTCTGTTGAGGGAGAAGGTCCTGGAAATGAAGCTCAGAAGTGGGAAGAACTATTTCAGGCTGCGCAGGACTGCTAA 1005 0.4647 MACSTATLPSAFTQFQSLPPRHVFIPKLRIRIASVSKQRRFNCKRVEVKAVSTDLQNGAISGEVNETGSSELKKDRQTNQSSSKLVLVVGGSGGVGQLVVASLLQRNIKSRLILRNPERATALFGDQDKETLQVVKADTRKQEDLDPSIFEGVTHVICTSGTTAFPSKRWEDDNTPERVDWVGVKNLVSALPSSVKRVVLVSSIGVTKYNELPWSIMNLFGVLKYKKMGEDFLQNSGIPFTIIRPGRLTDGPYTSYDLNTLLKATAGQRRAVLIGQGDKLVGEASRIVVAEACIQALDLQVTENQVYEVSSVEGEGPGNEAQKWEELFQAAQDC* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2899 334 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 71 331 - -
Lja3g2899 334 Pfam NAD(P)H-binding 90 298 IPR016040 -
Lja3g2899 334 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 71 331 - -
Lja3g2899 334 CDD SDR_a5 101 311 - -
Lja3g2899 334 Gene3D - 82 332 - -
Lja3g2899 334 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 82 311 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2899 Lja-Chr3 49581811 49591866 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2899 - - gmx:100804322 460.685