Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2852 ATGGATGAGTACTACTACAAGAGGAACCATGTGCCAGCATTTGGGAGCTGGGATTGGAATGACAACCTTCCATTCACTCAGTGTTTTGAGTCTGCAAGACAAGCTGGTTTGCTTCGTTATAGTTACGCTGCATCTGAAGAACAAGACCTTTACGTTGCTGGGGACTTGTATGAGAATCATGTTGTCACACCCGCTATGATCGTTGTTCCTCGCAGAAGGGAAAAGGTACGTGGCCCGCAAGACAAAGACGTAAAAAAGCAGAACTGGGTCAATAGTGTGAAGGAGCCACAAAACACAGGTCCAATTTCAAGGCCAACACCAAAGCCTGTGGACGAGGACTTGTACAAGATTTCACCAGAGCTTCTTTATGTCAAAAGTACGAAGAAGAGAGGATTCTGTTTCTTTCTGAGCTGCTTGTTACCAACTTGCATTGCATGA 438 0.4521 MDEYYYKRNHVPAFGSWDWNDNLPFTQCFESARQAGLLRYSYAASEEQDLYVAGDLYENHVVTPAMIVVPRRREKVRGPQDKDVKKQNWVNSVKEPQNTGPISRPTPKPVDEDLYKISPELLYVKSTKKRGFCFFLSCLLPTCIA* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2852 145 MobiDBLite consensus disorder prediction 73 89 - -
Lja3g2852 145 PANTHER PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR AVRRPT-CLEAVAGE: CLEAVAGE SITE PROTEIN-RELATED 1 144 - -
Lja3g2852 145 MobiDBLite consensus disorder prediction 73 111 - -
Lja3g2852 145 PANTHER EXPRESSED PROTEIN 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2852 Lja-Chr3 45414767 45417821 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2852 - - gmx:100306260 244.202