Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2812 ATGGCGGAATCACCATCCACCTCTTCTTCTTCATCACCACCTGATTCCAGAGACAACAAGTTGTGGAAAGGCATATTCGCCGTCTCCGGAATCATGGTTACCCTCGTCACCTATGGCGTCTTGCAGGAAAAGATCATGAGAGTTCCTTATGGAGCTCAAAAGGAATATTTCAAGCACTCACTCTTTCTTGTTTTCTGCAACCGTATCACAACATCTGCTGTTTCTGCTGGTTCTTTGCTGGCAAGTAAAAAAGCACTGGACCCAGTAGCTCCCATTTATAAGTATTGCCTTGTGTCTGTATCAAACATACTAACCACAACTTGTCAGTATGAGGCCCTCAAATATGTCAGTTTTCCAGTTCAGACTCTTGCAAAGTGCGCAAAAATGATACCGGTTATGATCTGGGGTACCATTATCATGCAGAAGAGATATCAGGGACCTGACTATATGCTGGCTTTTTTGGTTACCCTTGGCTGCTCAGTATTTATCCTATATCCGGCAGGAGAAGACATAAGTCCATACAGTAGAGGAAGGGAAAATACAGTTTGGGGCGTTCTCCTTATGACTGGCTATCTTGGGTGTGATGGCTTTACAAGCACATTTCAAGATAAGCTGTTTAGAGGCTATGACATGGAGATACATAATCAGATATTTTATACAACATTATGTTCTTGTATTCTTAGCCTGACAGGTCTTATTTTACAGGGACATCTAATACCAGCAATAGAGTTTGTTTATCGCCATCATGATTGTTTCTTTGACATAGCATTGCTTTCGACTGTGGCAACAGCTAGCCAGTTTTTTATTTCCTACACAATTCGCACTTTTGGTGCTCTGACATTCGCTACCATAATGACCACAAGACAGTTGGTGAGCATTATGCTGTCATGTGTGTGGTTTTCTCATCCTCTTAGCTGGGAACAGTGGATTGGAGCCGTCATTGTCTTTGGTTCCCTTTATGCAAAAAGCTTCACGAGGAAAGCACCTCAAAAAACAACCTCCTCCGACTCCATACCACTTGTTCAAAGTGGGGATTCAAATAATTTGAAGGACAACCCGTGA 1062 0.4247 MAESPSTSSSSSPPDSRDNKLWKGIFAVSGIMVTLVTYGVLQEKIMRVPYGAQKEYFKHSLFLVFCNRITTSAVSAGSLLASKKALDPVAPIYKYCLVSVSNILTTTCQYEALKYVSFPVQTLAKCAKMIPVMIWGTIIMQKRYQGPDYMLAFLVTLGCSVFILYPAGEDISPYSRGRENTVWGVLLMTGYLGCDGFTSTFQDKLFRGYDMEIHNQIFYTTLCSCILSLTGLILQGHLIPAIEFVYRHHDCFFDIALLSTVATASQFFISYTIRTFGALTFATIMTTRQLVSIMLSCVWFSHPLSWEQWIGAVIVFGSLYAKSFTRKAPQKTTSSDSIPLVQSGDSNNLKDNP* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2812 353 PANTHER UDP-GALACTOSE/UDP-GLUCOSE TRANSPORTER 5 16 341 - -
Lja3g2812 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 255 321 - -
Lja3g2812 353 MobiDBLite consensus disorder prediction 330 353 - -
Lja3g2812 353 Pfam UAA transporter family 24 323 IPR013657 GO:0055085
Lja3g2812 353 PANTHER SOLUTE CARRIER FAMILY 35 MEMBER B 16 341 IPR013657 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2812 Lja-Chr3 42629713 42635196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2812 17 347 Organic Solute Cotransporters AT5G59740 79.279 0.0 562
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2812 K15276 - gmx:100789415 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2812 3 42629713 42635196 Lja3g2812 3 42629713 42635196 ECH
Lja3g2812 3 42629713 42635196 Lja3g0753 3 7622565 7627171 PCT