Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2602 ATGGTACTTGCTGGTAAGCTTATTACTGAAGTTGGGGTCAAAACCCCAGCTGACAAGTTCTACAACCTCTTCACAACTCAGCTTCACGATGTTCAAAAGCACGCTGAAAAAGTGCATGAAACCAAGGTTCATGAAGGCGACTGGCATGGTATTGGCTCAGTTAAACATTGGACTTACGTCGTAGATGGCAAGGTGATCACATGCCTGGAGCGTGTTGAAGCCATTGATGAACAGAACAAAACAAACAAATACACCCTTTTCGGTGGTGACATCGATCCGCACTACAAGAACTTTACGCTGATTTTACAAGTGATTGATAACAAAGATAGCCATGCTGTTGCTAGGTGGACTATTGAATATGAGAAGCTCCATGAAGACATTGAACCTCCAAATGGCTACATGGAGTACTTTAACAAGCTCACTAGAGATGTTGATAACCAGATTCACAAGGCATAG 456 0.4276 MVLAGKLITEVGVKTPADKFYNLFTTQLHDVQKHAEKVHETKVHEGDWHGIGSVKHWTYVVDGKVITCLERVEAIDEQNKTNKYTLFGGDIDPHYKNFTLILQVIDNKDSHAVARWTIEYEKLHEDIEPPNGYMEYFNKLTRDVDNQIHKA* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2602 151 Pfam Pathogenesis-related protein Bet v 1 family 3 150 IPR000916 GO:0006952
Lja3g2602 151 PANTHER MLP-LIKE PROTEIN 423 1 149 - -
Lja3g2602 151 SUPERFAMILY Bet v1-like 6 148 - -
Lja3g2602 151 SMART Bet_v_1_2 2 151 IPR000916 GO:0006952
Lja3g2602 151 Gene3D - 1 149 IPR023393 -
Lja3g2602 151 PANTHER PATHOGENESIS-RELATED PROTEIN BET V I FAMILY PROTEIN 1 149 - -
Lja3g2602 151 CDD Bet_v1-like 5 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2602 Lja-Chr3 35542904 35543879 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2602 - - gmx:100794745 205.682