Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2454 ATGGCGCTCCCTCTCTCTTCCTCCTTCAACCTCCCCTTCACTTCTCACCGCTCTCCATCTCTCTTCTCCACCTCCTCCTACTTCCACCGCGCCTCACCACCACCACCACCGTCCCCTTCTCGAATCTTCTGCTTCTCAAACAAGCTTCACCACCTCACCAAGGAACTGTTATCTGACACGTCAGCGAGTGTGGTTGTTGAGAGGATAACGAACCAGTTGATGAAGAGTGTCATGATTCCTGTCATAATTGCCTCCACAATTCTTCTTCCTCCGTTGATCGATTCGTCGCCTCCGGTTGCGAAGGCGGTTCTGTATTCGCCGGATACAAAGGTTCCAAGAACAGGTGAAGTTGCTCTCAGGAAAGCCATTCCTGCAAATGCTAGCATGAAGGCTATACAGGACTCTCTTGAGGATATTTCGTACTTGTTGAGGATTCCGCAAAGAAAACCTTACGGGACAATGGAGGGGAATGTCAAGAAAGTTTTGAAGATAGCTGTGGATGAAAAGGATGCTATATTGGCAAGTATACCAGCAGAACTGAAGGAAAAAGGCTCTTTGGTACATGAATCTCTGATAGGTGGAAAGGGGGGGTTACAATCTCTCCTTCAATCAATAAAGGAACAGGATGCGGATAGAGTTTCTGTGAACCTTCAATCTACACTGGATACTGTAGCAGAGTTAGAGTTATTACAGGCCCCGGGGATATCTTTTCTGTTGCCGGAGCAATACTTGCAATATCCACGGCTTTCAGGGAGAGGAACTGTCGAGTTCATCATTGAGAAAGGAGATGATTCAACATTTTCTCGAGTTGGTGGAGAAGAGAGAAAAATTGGCACACTTCAGGTTGTTTTAGATGGATACTCAGCTCCATTAACGGCTGGGAATTTTGCAAAACTGGTGATGGATGGAGCATATAATGGTATAAAGCTTAGCAGTATCAATCAAGCTATTCTCTCAGAAAATGGACAGGATAAGAACATTGGTTACAGTGTTCCCTTGGAAATAAAGCCCACTGGACAATTTGAGCCCCTTTATAAAACAACATTAAGTGTGCAGGATGGAGAACTTCCTGTCCTTCCTCTGTCTGTTTATGGGGCAGTTGCCATGGCTCATAACGAAGCCTCTGAGGAGTATTCATCACCTTATCAGTTTTTCATCTATCTCTATGATAAACGAAATTCTGGCTTGGGAGGGATATCATTTGATGAAGGCCAATTTTCAGTTTTTGGATACATAACCACTGGGAGAGACATTCTCCCCCAGATAAAAACCGGTGATATTATTCGTTCTGCGAAGCTTATTGAAGGCCAAGACCGCCTTGTCTTGCCGAAGGACAGTTGA 1341 0.4504 MALPLSSSFNLPFTSHRSPSLFSTSSYFHRASPPPPPSPSRIFCFSNKLHHLTKELLSDTSASVVVERITNQLMKSVMIPVIIASTILLPPLIDSSPPVAKAVLYSPDTKVPRTGEVALRKAIPANASMKAIQDSLEDISYLLRIPQRKPYGTMEGNVKKVLKIAVDEKDAILASIPAELKEKGSLVHESLIGGKGGLQSLLQSIKEQDADRVSVNLQSTLDTVAELELLQAPGISFLLPEQYLQYPRLSGRGTVEFIIEKGDDSTFSRVGGEERKIGTLQVVLDGYSAPLTAGNFAKLVMDGAYNGIKLSSINQAILSENGQDKNIGYSVPLEIKPTGQFEPLYKTTLSVQDGELPVLPLSVYGAVAMAHNEASEEYSSPYQFFIYLYDKRNSGLGGISFDEGQFSVFGYITTGRDILPQIKTGDIIRSAKLIEGQDRLVLPKDS* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2454 446 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 267 423 IPR002130 GO:0000413|GO:0003755
Lja3g2454 446 SUPERFAMILY Cyclophilin-like 276 430 IPR029000 -
Lja3g2454 446 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 277 427 IPR002130 GO:0000413|GO:0003755
Lja3g2454 446 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC 65 445 IPR044259 -
Lja3g2454 446 Gene3D - 125 230 IPR023222 -
Lja3g2454 446 Gene3D - 262 437 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2454 Lja-Chr3 30568566 30572899 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2454 - - aip:107630088 629.017