Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2453 ATGGGAGAAGAAGACAACTACGCCAGGGAATTGGAGGTGGCCGTTAGGGTTGTTCACGTGGCGTGTGCTCTCTGTGGGAGGGTGCAAGAGAGGCTCCTTGCGACCAGCAATGATCACGTTGTGTCTAAGGATGATGATTCTCCTGTTACCGTTGCAGACTTGAGTGTTCAAGCAACTGTTAGTTGGCTGCTATCAGAAATTTTTGGGGTTCAAAATGTGTCAATTGTTGCTGAAGAAGATACAGAAACTTTCTCCAAGGATGATTCAGCAGGCTTACTGGAAGCTGTCGTGAATACTGTCAATGAGTCTTTAGCCTTTGCATCCAAGTATGGTCTTCAAAGTCCAGAGAGGACACTTGGAACATCGGAAGTCCTTGAGGCCATTGGCCGCTGCAACTCAACAGGAGGCCCCGGTGGAAGACATTGGGTACTTGACCCTGTTGATGGCACATTAGGATTTGTACGTGGGGATCAGTATGCTGTTGCTCTAGCTCTTATTGAGGATGGAAAAGTTGTTCTCGGAGTTCTTGGGTGCCCCAATTACCCTGTGAAGACAGAATGGCTAAACTATCATTACCAGTATCATCAAACAACATCACAATCATCTCCAACAACTCCTGATGCATGGGGAAAAGGATGTGTTTTGTATGCAAGGAGAGGCAGTGGTGAGGCATGGTTGCAGTCATTAATTCCTGGTGATAAGATGCTAGAATGGCCAAATTTTGCTAGACCTATTCAGGTTTCCTCCACAGATGATCCTGCATTGGCAACTCTATGTGAACCAGTGGAACGGGCAAACTCGAACCATTCCTTCACAGCTGGTCTTGCTCACACGGTGGGACTTAGAAAACAGCCTTTACGCGTCCACAGCATGGTAAAATATGCAGCTATAGCCCGGGGAGACGCTGAGATATTCATGAAATTTGCAAAATGTGGTTACAAGGAGAAGATATGGGATCATGCTGCCGGTGTTGTGATTGTTGAAGAGGCTGGTGGTGTGGTAACTGATGCCGGAGGTCGCCCTCTGGACTTTTCGAAGGGAATGTACTTAGAGGGTCTTGACAGGGGCATAATTGCATGCTCTGGTGTCACGTTGCATGAAAAATTGATCAGTGCTGTTTATGCTAGCTGGGACTCCTCAAATTTATGA 1149 0.4691 MGEEDNYARELEVAVRVVHVACALCGRVQERLLATSNDHVVSKDDDSPVTVADLSVQATVSWLLSEIFGVQNVSIVAEEDTETFSKDDSAGLLEAVVNTVNESLAFASKYGLQSPERTLGTSEVLEAIGRCNSTGGPGGRHWVLDPVDGTLGFVRGDQYAVALALIEDGKVVLGVLGCPNYPVKTEWLNYHYQYHQTTSQSSPTTPDAWGKGCVLYARRGSGEAWLQSLIPGDKMLEWPNFARPIQVSSTDDPALATLCEPVERANSNHSFTAGLAHTVGLRKQPLRVHSMVKYAAIARGDAEIFMKFAKCGYKEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSKGMYLEGLDRGIIACSGVTLHEKLISAVYASWDSSNL* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2453 382 ProSitePatterns Inositol monophosphatase family signature 2. 318 332 IPR020550 GO:0046854
Lja3g2453 382 Gene3D - 246 376 - -
Lja3g2453 382 Pfam Inositol monophosphatase family 45 377 IPR000760 GO:0046855
Lja3g2453 382 ProSitePatterns Inositol monophosphatase family signature 1. 142 155 IPR020583 -
Lja3g2453 382 PANTHER PAP-SPECIFIC PHOSPHATASE HAL2-LIKE 4 382 - -
Lja3g2453 382 SUPERFAMILY Carbohydrate phosphatase 7 375 - -
Lja3g2453 382 CDD PAP_phosphatase 10 375 - -
Lja3g2453 382 PANTHER PHOSPHATASE 4 382 - -
Lja3g2453 382 Gene3D - 6 235 - -
Lja3g2453 382 TIGRFAM bisphos_HAL2: 3'(2'),5'-bisphosphate nucleotidase 7 381 IPR006239 GO:0006790|GO:0008441
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2453 Lja-Chr3 30561938 30567046 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2453 K01082 - gmx:100806320 666.766