Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2449 ATGATAAAGGAGTTCAACACCCAAACAAGAGTCAGTGTGGGGTTGGAAACCCTCTGGACTGTTCTGTCCAAGGATTTCATTTTCATATCTCCAAAAGTTCTCCCAACTATTGTGAAAGATGTGCAAGTGATTGAAGGCGATGGAGGAGTTGATACAATCCTCATCTTTAACTTTTTTCCTGGTGTATCCCCACTAGGTTTCCAGAGGGAAAGGATCACAGAGTTTGATGAGGTTTCCCATGAAATTGGGCTGCAAGTGATTGAAGGGGGCTATCTGAGTCAAGGTTTGTCATACTACAAAACAACTTTCCAACTATCTTCAATAGAGGAGCTTGAAACTTTGGTCAACGTGAAGATCTCTTATGATCATGAATCTGATGAGATAGATGAAAATGTTAAGCCGACGAAGACATCACAGTCAACTTTGATGTATCTTAAGCGCCTTGAAAACTATCTGCAGAATGAAGCTTGA 471 0.4076 MIKEFNTQTRVSVGLETLWTVLSKDFIFISPKVLPTIVKDVQVIEGDGGVDTILIFNFFPGVSPLGFQRERITEFDEVSHEIGLQVIEGGYLSQGLSYYKTTFQLSSIEELETLVNVKISYDHESDEIDENVKPTKTSQSTLMYLKRLENYLQNEA* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2449 156 SUPERFAMILY Bet v1-like 5 153 - -
Lja3g2449 156 Pfam Pathogenesis-related protein Bet v 1 family 31 154 IPR000916 GO:0006952
Lja3g2449 156 PANTHER PHYTOHORMONE-BINDING PROTEIN 3 155 - -
Lja3g2449 156 CDD Bet_v1-like 3 152 - -
Lja3g2449 156 Gene3D - 1 156 IPR023393 -
Lja3g2449 156 PANTHER - 3 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2449 Lja-Chr3 30299927 30301330 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2449 - - lja:Lj3g3v1260010.1 282.722