LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja3g2303	ATGGCGGCAACCCAACCACCACCACTGGCTGCGGATCGCACCACCGAAGAGATGCCGGCTGAACCAGATAACTTGAAGGATCAGGTACTGGGTACAGCAACTATAGGTCATTCAAGGGAGACCACTAGTCAATCAGAATCTTTTGGTTCTGGTGGAGATTGTCCTTTGTACTCTCCTAATGTGTATGCTCCCCAGGCTCAGGCTTTCTACTACAGAGGTTTTGACAATGGAAATGGCGAATGGGATGAATATCCTTCATATGTCAATTCTGGGGGAGTAGAACTCGGATCTCCTGGTGTCTACAATGAAAATCAATCCCTGGTCTTCCATTCTGGATACGGCTTCAACCCTCAGCTGCCTTATGGACCATATTCCCCAGTTACCACACCTTTGCCTTCAGTAGGTGGAGACGCACAGTTATACTCACATCAGCAATTTCCCTTCACTGGGCCGCCTTATTACCATCAGCTGGTTCCTCCTAGCTTACCATACCTTAATTCACCGACTCCAGTTTCTCAGCCAGAGCTCACCAATCTGGTAGGTATTGACCAGCAAGTTGATAGCATGTTTTTTGGACCAAGAGCTGGTTATCCTTCTGTGGGATCTTTTGGTAGAGGAAACTTTCCTGTAGCACCTGGTTCCTTTAACTTTCATGAATCCCAACAAGGATTCGATGGATCAAGATCTGGTGGAATCTGGTCAGATTGCTCAAAACCCTCAGAAAGGCAGAGGTCTTTGATGCCTCTATCTCCATCTGTTTCTCCACAGCCAATTGGCTCACTTGGGTCATTCGGGCTGAGTGCTGGAATGGCATCTCATCAGCAGCGACCATTGTATGGGTTTGGATCTGGTTCAAACTCCTATGGTAGAGGCTATCACTCTAATCATGGTTCTAGCTTTGGAGACGCTGCCATTCCCAGTCTTGGTACTAATGATAGAAGCTTCCTTTCCCTTGAAAATAGTAGACGACAAGGCAGGGCAGCTGCTTCTCTTTGCAAATGTAATGGTGCTCTTGATATCCTTAGTGAGCAGAACCGTGGCCCGAGGGCCTCAAAGGTGAAAAATCAAATATCAGCTGAAAATAATTCTGTTGATAGTAATAAAAATAATGCATCTCCTGCCAAGTTCCAAGATGAATCATTCAATCAGCCAGATTTTGCCACAGATTACAAGGATGCCAAATTTTTTGTCATCAAATCTTACAGTGAAGATAATGTTCACAAGAGCATTAAATATGGTGTCTGGGCTAGTACACCAAATGGAAATAGAAAGTTAGATGCTGCTTATTGCCAAGCAAAGGAGAAGCAAGATGCCTCTCCCATATTTCTCTTTTTTTCGGTAAATGCTAGTGCTCAGTTCTGTGGAGTAGCTGAAATGGTTGGGCCTGTCAATTTTGATAAGAATGTGGACTTCTGGCAGCAAGATAAGTGGAGTGGACAGTTTCCTGTGAAGTGGCACATGATTAAAGATGTTCCGAACAGTCAGTTTCGTCACATTGTTCTTGAAAACAATGATAACAAACCCGTTACCAACAGTCGAGATACTCAGGAGGTGAAGTTGCAACAAGGGATTGAAATGTTGTCCATTTTCAAAAACTATGAGACTGATGTGTCCATCCTGGATGATTTTGATTTCTATGAAGAGCGCCAGAAGGCCATGCAAGAACGAAAGGTGCGGCAGCAAAGCAGCTTGGTGGCTGCTGGGTTAGTTGGAGAAAATGAGCATAGGAGTTCTGCCAACAGTACTAATGATTTCATCAAACAGTTGCCAAAGAGCTTTGCTCTAGTTGTCCGCTTAGATGAGAATAACAACAAAGAAATCACTGCTGCTAATGCTAATAGAGATAATTTAGCGTCTGATGGACTCATTGGCAAAGTGATTAAACCTGAGGATGTCATTTCGGTGACTGCCTCTTCAACTCAAACCAGTTAG	1932	0.442	MAATQPPPLAADRTTEEMPAEPDNLKDQVLGTATIGHSRETTSQSESFGSGGDCPLYSPNVYAPQAQAFYYRGFDNGNGEWDEYPSYVNSGGVELGSPGVYNENQSLVFHSGYGFNPQLPYGPYSPVTTPLPSVGGDAQLYSHQQFPFTGPPYYHQLVPPSLPYLNSPTPVSQPELTNLVGIDQQVDSMFFGPRAGYPSVGSFGRGNFPVAPGSFNFHESQQGFDGSRSGGIWSDCSKPSERQRSLMPLSPSVSPQPIGSLGSFGLSAGMASHQQRPLYGFGSGSNSYGRGYHSNHGSSFGDAAIPSLGTNDRSFLSLENSRRQGRAAASLCKCNGALDILSEQNRGPRASKVKNQISAENNSVDSNKNNASPAKFQDESFNQPDFATDYKDAKFFVIKSYSEDNVHKSIKYGVWASTPNGNRKLDAAYCQAKEKQDASPIFLFFSVNASAQFCGVAEMVGPVNFDKNVDFWQQDKWSGQFPVKWHMIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLQQGIEMLSIFKNYETDVSILDDFDFYEERQKAMQERKVRQQSSLVAAGLVGENEHRSSANSTNDFIKQLPKSFALVVRLDENNNKEITAANANRDNLASDGLIGKVIKPEDVISVTASSTQTS*	644

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja3g2303	643	MobiDBLite	consensus disorder prediction	1	51	-	-
	Lja3g2303	643	Gene3D	ph1033 like domains	370	545	-	-
	Lja3g2303	643	MobiDBLite	consensus disorder prediction	34	51	-	-
	Lja3g2303	643	PANTHER	EVOLUTIONARILY CONSERVED C-TERMINAL REGION 5	25	616	-	-
	Lja3g2303	643	MobiDBLite	consensus disorder prediction	359	379	-	-
	Lja3g2303	643	MobiDBLite	consensus disorder prediction	219	253	-	-
	Lja3g2303	643	ProSiteProfiles	YTH domain profile.	393	530	IPR007275	GO:0003723
	Lja3g2303	643	Pfam	YT521-B-like domain	393	531	IPR007275	GO:0003723
	Lja3g2303	643	PANTHER	YTH YT521-B HOMOLOGY DOMAIN-CONTAINING	25	616	IPR045168	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lja3g2303	Lja-Chr3	27591890	27601652	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja3g2303	K20102		-	gmx:100816860	1105.51