Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2284 ATGGATTTTTTGAAAATCAAGAAGTTCAGGAAATCTCAGAAAGGGAATGGAGAAAAGGATTTGACGGACAAGGCAGTGCCGGAGCCTGAAGAACCAAAGACTAACACTGGCGGTCCTGATCAGTGTAAATCAGAAAATGCTGATCCTGCTGGTGACGCTGAGGACGACGATGATTTTATTACCAACGAGGTCAAGAGGAGGCTGAAAGAATTGAGAAGAAACAGTTTTATGGTGTTGATTCCTGAAGAAGATTCCTGCCCGGAGGAGGGGGAGGATGAAGAGGAAGAGGGGGAGACTAGCTCGAACGAGTGGAGGGATGTGGAGGCAGAAGGTCAGCAGTGGTGGCGTGGCTTTGATGCTGTGTTTGAAAAGTACTGTGAAAAAATGCTATTCTTCGATCGGATGAGTATGCAGCAGCTTAATGAAATTGGCAAAGGTTCTCTACAAACTTCAACTCAATCTCCAAGATCTGCGTCGAAGAAGTTGACTTCTCCTCTTCGATGTCTTTCCTTGAAAAAATTTGAAGAACCTGATGAGGATACTGAACATCTTCAACAGCCTGGAAATGATCCCTACCTGGATATTGAAATGGCGTATGTTGGTCAAATTTGCTTAACTTGGGAGGCACTTCATTGTCAATACTCGCATACAAGTCAGAAGATATCCTGGCAACCTGAAAATCCTACCTGTTACAACCATAGTGCGCAGGAGTTTCAGCAGTTCCAAGTTCTATTACAAAGGTTTATTGAAAATGAACCTTTCGAGCAGGGCCCTCGAGCTGAAAGTTATGCTCGCACAAGGAAGGCTTTGCCTAAACTGCTACAGGTTCCTAATATACGAGGTTCAGATCATGAATTAACAGATGATTCAGACATGAGAGTTCTTGCTCCTGATCTTATCAGGATAATTGAAAATTCTATCCTCACATTCCACCTTTTCCTGAAGAGGGACAAGAAAAAGTCAAGTGGTGTTATCAACCTGTTTGGAAACCAGAACCAGCTTGCAACTCCTCTTCAGCAGGTTCAATCTACACTTGATAAGAAAGTGTTGAAACTTAAGGAACTGCGCAGAAAGGTGAAGGGTTGGAAAAAAAATTCCTGGCCCCAGAAGCACGAGGACATTCAGCTATTGCTTGGCCTTATCGATGCGAAAATCATATCAAGGGTTCTGAGGATGACGCGGATGAGTAGAGAACAGCTGTTTTGGTGTGAAGAAAAGATGAAGAAACTGGATTTATCAAATGGTAGGTTAGAGAGGGATCCATGCCCTATCCTCTTCCCTTGCTAG 1287 0.4359 MDFLKIKKFRKSQKGNGEKDLTDKAVPEPEEPKTNTGGPDQCKSENADPAGDAEDDDDFITNEVKRRLKELRRNSFMVLIPEEDSCPEEGEDEEEEGETSSNEWRDVEAEGQQWWRGFDAVFEKYCEKMLFFDRMSMQQLNEIGKGSLQTSTQSPRSASKKLTSPLRCLSLKKFEEPDEDTEHLQQPGNDPYLDIEMAYVGQICLTWEALHCQYSHTSQKISWQPENPTCYNHSAQEFQQFQVLLQRFIENEPFEQGPRAESYARTRKALPKLLQVPNIRGSDHELTDDSDMRVLAPDLIRIIENSILTFHLFLKRDKKKSSGVINLFGNQNQLATPLQQVQSTLDKKVLKLKELRRKVKGWKKNSWPQKHEDIQLLLGLIDAKIISRVLRMTRMSREQLFWCEEKMKKLDLSNGRLERDPCPILFPC* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2284 428 Coils Coil 338 365 - -
Lja3g2284 428 MobiDBLite consensus disorder prediction 1 30 - -
Lja3g2284 428 Pfam Protein of unknown function (DUF1666) 194 427 IPR012870 -
Lja3g2284 428 MobiDBLite consensus disorder prediction 84 101 - -
Lja3g2284 428 PANTHER DUF1666 FAMILY PROTEIN (DUF1666) 1 428 - -
Lja3g2284 428 MobiDBLite consensus disorder prediction 1 60 - -
Lja3g2284 428 MobiDBLite consensus disorder prediction 79 107 - -
Lja3g2284 428 PANTHER DNA LIGASE (DUF1666)-RELATED 1 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2284 Lja-Chr3 27371308 27374080 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2284 - - gmx:100804417 723.776