Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2277 ATGGATATTGCACATGATCGAGCTGGATTTTATATTTGCTGGGGCTGTTTGGTGTGGGTTCCATCTGTGTACACTTCTCCTGGAATGTACCTTGTCAACCATCCTGTAAATCTTGGCACCCAGCTTGCTCTTTTTATCTTAGTGGCTGGCATTCTTTGCATATACATCAACTATGATTGTGACAGGCAAAGGCAAGAATTTCGTCGGACAAATGGAAAATGCTTGGTCTGGGGAAAAGCTCCATCAAAGTTTTTACCTTACTTCTATGTGATATTTCTTACCATCCTTCTTTTTGATCGAGCAAAAAGGGATGACGATCGATGCAGATCCAAGTATGGCAAGTACTGGAAACTGTATTGCGACAAG 366 0.418 MDIAHDRAGFYICWGCLVWVPSVYTSPGMYLVNHPVNLGTQLALFILVAGILCIYINYDCDRQRQEFRRTNGKCLVWGKAPSKFLPYFYVIFLTILLFDRAKRDDDRCRSKYGKYWKLYCDK 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2277 122 PANTHER 7-DEHYDROCHOLESTEROL REDUCTASE 1 84 - -
Lja3g2277 122 PANTHER 7-DEHYDROCHOLESTEROL REDUCTASE 83 122 - -
Lja3g2277 122 Pfam Ergosterol biosynthesis ERG4/ERG24 family 83 121 IPR001171 GO:0016020|GO:0016126|GO:0016628
Lja3g2277 122 Pfam Ergosterol biosynthesis ERG4/ERG24 family 1 70 IPR001171 GO:0016020|GO:0016126|GO:0016628
Lja3g2277 122 ProSitePatterns Sterol reductase family signature 2. 96 119 IPR018083 GO:0016628
Lja3g2277 122 PANTHER DELTA(14)-STEROL REDUCTASE 1 84 - -
Lja3g2277 122 PANTHER DELTA(14)-STEROL REDUCTASE 83 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2277 Lja-Chr3 27301614 27303730 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja3g2277 1 122 Miscellaneous Gene Families AT1G50430 67.251 1.47e-74 226
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2277 K00213 - jre:109004249 243.432