Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2272 ATGGGTTCAAGATTCCCATCTCATCAGCTAAGCAATGGCCTGTATGTATCGGGCCGTCCTGAACAGCCGAAAGAAAGGACACCGACAATGAGCTCAGTTGCCATGCCTTATACTGGCGGTGACATCAAGAAATCGGGAGAATTGGGGAAAATGTTTGACATCCCCTCAGATGGCTCTAAATCTAGAAAGTCTGGTCCCTTAAGTAATGCTCCTTCTAGGACGGGATCCTTTGCGGGCGCCGCTTCTCACTCTGGACCTATCATGCAAAATGCGGCGGCTCGCTCTGCTTATGTCACATCTGGTAATGTCGCTGCCGGAGGAATGTCCGGTTCAGCCTCAATGAAAAAGACCAACTCTGGCCCGCTGAATAAACACGGGGAACCAATCAAGAAATCATCTGGCCCTCAATCTGGTGGAGGTACACGCCAAAACTCTGGGCCGATACCTCCTGTTCTTCCTACGACTGGTCTGATTACATCCGGCCCGCTAAATTCATCTGGGGCTCCTAGGAAGGTGTCTGGTCCGTTAGAGACTACAGGATCGATGAAATCACATAGTTCCTCTGTGGCTCACAATCCAGCTGTGACTACTCTTAGTTTAGATGATGAATATTCCTTCAAGAGGAACTTCCCTAAACCAATATTGTGGTCTGTGATTCTGATTTTTCTTATGGGATTCATTGCTGGCGGTTTTATTCTTGGAGCTGTCCACAATGCCATACTCCTTAGTGTTGTCGCAGTTCTTTTTGCTGTGGTTGCTGCATTATTCACTTGGAATAGTTGTTGCGGAAGGAAAGCCATTGCTGGTTTCATTTCTCAATATCCTGATGCAGAGCTTCGAACTGCCAAGAATGGGCAATTTGTGAAGGTTTCTGGGGTGGTTACCTGCGGAAATGTTCCACTAGAGTCCTCCTTTCATAAAATTCCTAGATGTGTATATACATCCACAAGCTTGTTTGAATATCGAGGATGGGATTCAAAAGCAGCTAATCCAAAACATCGCCATTTTACATGGGGACTTCGTTCAACTGAGAGGCATGTGGTTGACTTTTACATCTCTGATTTCCAATCTGGATTGAGAGCATTGGTTAAAACAGGCTATGGTGCAAGGGTGACTCCCTATGTTGATGATTCCATTGTAATTGATGTTAATCCAGCCAATAAAGACATGTCCCCTGAGTTTCTTCGATGGTTGGGAGACAGAAAGCTTTCTAGCGACGATCGTATTATGCGATTAAAAGAAGGGTACATCAAAGAAGGTAGCACGGTGAGCGTAATGGGAGTTGTTCAAAGAAATGACAATGTGCTGATGATTGTGCCTCCTCCTGAGCCTTTGACGACCGGATGCCAATGGGCGAAATGTATATTTCCAGCTAGCCTTGAGGGTATTGTTTTGAGATGCGAAGATACATCGAAGGTTGATGTCATTCCAGTGTAG 1437 0.4572 MGSRFPSHQLSNGLYVSGRPEQPKERTPTMSSVAMPYTGGDIKKSGELGKMFDIPSDGSKSRKSGPLSNAPSRTGSFAGAASHSGPIMQNAAARSAYVTSGNVAAGGMSGSASMKKTNSGPLNKHGEPIKKSSGPQSGGGTRQNSGPIPPVLPTTGLITSGPLNSSGAPRKVSGPLETTGSMKSHSSSVAHNPAVTTLSLDDEYSFKRNFPKPILWSVILIFLMGFIAGGFILGAVHNAILLSVVAVLFAVVAALFTWNSCCGRKAIAGFISQYPDAELRTAKNGQFVKVSGVVTCGNVPLESSFHKIPRCVYTSTSLFEYRGWDSKAANPKHRHFTWGLRSTERHVVDFYISDFQSGLRALVKTGYGARVTPYVDDSIVIDVNPANKDMSPEFLRWLGDRKLSSDDRIMRLKEGYIKEGSTVSVMGVVQRNDNVLMIVPPPEPLTTGCQWAKCIFPASLEGIVLRCEDTSKVDVIPV* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2272 478 MobiDBLite consensus disorder prediction 1 83 - -
Lja3g2272 478 PANTHER OSJNBA0035M09.9 PROTEIN 1 478 IPR040339 -
Lja3g2272 478 MobiDBLite consensus disorder prediction 61 79 - -
Lja3g2272 478 MobiDBLite consensus disorder prediction 134 150 - -
Lja3g2272 478 PANTHER UBIQUITIN-SPECIFIC PROTEASE FAMILY C19 PROTEIN 1 478 - -
Lja3g2272 478 MobiDBLite consensus disorder prediction 1 16 - -
Lja3g2272 478 MobiDBLite consensus disorder prediction 106 120 - -
Lja3g2272 478 MobiDBLite consensus disorder prediction 106 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2272 Lja-Chr3 27229891 27234962 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2272 - - gmx:100820095 902.894