Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2270 ATGGCAGCGACAATGACCATGGCCTCCGCGCGTCTCATCGCGTTTCACACTCCCTCCGCCGCAAAGAACCAATCTCCTCCATGTCTGATTGGCCGGCGGCACCCACACCCACCACAGTGCCACCTTCCGCGCCTTCTCCACAACCACCGCCAAACCAGAACCGTTTCCTGTTCTCTGACGACAAATCAGAGAAACTCACCCGTTTGCGAAATTCGCGAATCAGCACATACCACACTCTCCGGTTCCACTCGCACCGTCACAACCTTATTGAGCATGGCCCTGTTGTGCGCCAAGGCGATTCCGCCGCTTGCGAACGGCGCGATTTCGATGTCGGTGGGTGGTTCTTCTCTGTTCTTCGCGTCGTTGCGGGACCGTCCTGAGGGGTATTTGAACACGCCGTTGACGGTTGTGGCGGCGGGGTTGGGGAAGTGGCTTGATATTTACAGTGGGGTTTTGATGGTTAGGGTTTTGCTCAGTTGGTTCCCGAATATCCCTTGGGAGCGTCAGCCTCTGTCTGCAATTCGAGACCTCTGTGATCCTTATCTGAACTTGTTCAGGAATATCATTCCACCTGTTTTTGATACGCTTGATGTTAGTCCTCTTCTTGCTTTTGCGGTTTTGGGTACTCTTGGCTCCATTCTTCAGACTGCTATGACTTGA 660 0.5379 MAATMTMASARLIAFHTPSAAKNQSPPCLIGRRHPHPPQCHLPRLLHNHRQTRTVSCSLTTNQRNSPVCEIRESAHTTLSGSTRTVTTLLSMALLCAKAIPPLANGAISMSVGGSSLFFASLRDRPEGYLNTPLTVVAAGLGKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPVFDTLDVSPLLAFAVLGTLGSILQTAMT* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2270 219 Pfam YGGT family 145 213 IPR003425 GO:0016020
Lja3g2270 219 PANTHER YLMG HOMOLOG PROTEIN 1-2, CHLOROPLASTIC 41 217 - -
Lja3g2270 219 PANTHER YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC 41 217 IPR003425 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2270 Lja-Chr3 27214839 27217285 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2270 - - lja:Lj3g3v2039930.1 440.269