Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2221 ATGGCTGATATCTCATCTGGAAAACCCTCACTCAGCAACATCAACCATTTTTCAGATGATTTGTTAGTAGAAATTTTCATCCGATTGCCATTCAGATCCATCGCTGGATGCAAATGCACCTCCAAGCGTTGGTTAGATTTGATTTCATCCCCAATTTTCATACAACAATTTATCACTCGTCAGAACAATCTCTTCAATGCTTTCTTGATCTTCCTCACACCCCATGAGCTTATGCTAGGTTTCATCACCCCAGATGATGATCCACCTCTCATCCCAGATTTGGGTTTGTCCCCAGACATCCTCGTCAAAGGAAACGTCTGTGGTTGTTCCAATGGTTTGCTATTGTGCTGTAACACCAGATACACAACTGGTAATGGCTATTCCATTTACAATCCGCTTACCAAACAATGCACCCAGATAGCCCCATCTCCTGCAAACCAGATTGGGAATCTGTACGCGGTAGGGTTTGTTTGTGATCCATTTTTCGGGCTTTCGCGAGAAGTAGTAGCTGCAGCGGCGGAATCGTTGGTTCAGGTTCAACGCGATCGCAGTTTTCGCGTGGTGATTATTCGGTCTTTCATTAGAAGATCGTTCGAGTTTGAAGTGTCGGTTTTCGAGTCGGAGACCGGGACGTGGGAGCAGACGGTGGTGACTTGCCCGGATGGTTTTGCTTTTGCTCCTCATTGGCTTCTCAGTGTTGAGTATGAAGGGTTCCTTTATTTTATGGGGAGGACTAGCATTTTTGTTTTTGATCCTTATAGCAAAGAGAGTGATGTTCTTGATTATCCAGACGATGCTGATTCGATGAATATAATGAGTTTCGGGTTTCTTGGAACCTGTTGTGGGAGACTGAGGATTGCTGATATTGGCCTAAATTATTTGACTGTGTGGGAACTGATAGAAAATGATTACTGGGATTTGGTGCACACTACCAATCTATCAACAAAACTCCCTGATAAGTTTTGTAATAACTACTATAAGCGAGTAGCGGGTTTCCATCCTTATGATGGGGACATTGTGTATCTGCATTCTTATGCTGATGGGGTTTTTGTTGCCAACCTGGGGACTGATGAATTTGAGGCTATTCCTGGTTATGAGAAATCTGATATAAGTCCCTTTCAACTAGTGTTTCCATTGTAG 1140 0.4333 MADISSGKPSLSNINHFSDDLLVEIFIRLPFRSIAGCKCTSKRWLDLISSPIFIQQFITRQNNLFNAFLIFLTPHELMLGFITPDDDPPLIPDLGLSPDILVKGNVCGCSNGLLLCCNTRYTTGNGYSIYNPLTKQCTQIAPSPANQIGNLYAVGFVCDPFFGLSREVVAAAAESLVQVQRDRSFRVVIIRSFIRRSFEFEVSVFESETGTWEQTVVTCPDGFAFAPHWLLSVEYEGFLYFMGRTSIFVFDPYSKESDVLDYPDDADSMNIMSFGFLGTCCGRLRIADIGLNYLTVWELIENDYWDLVHTTNLSTKLPDKFCNNYYKRVAGFHPYDGDIVYLHSYADGVFVANLGTDEFEAIPGYEKSDISPFQLVFPL* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2221 379 SUPERFAMILY Tricorn protease N-terminal domain 116 372 - -
Lja3g2221 379 PANTHER F-BOX PROTEIN INTERACTION DOMAIN PROTEIN-RELATED 13 360 - -
Lja3g2221 379 Pfam F-box domain 17 51 IPR001810 GO:0005515
Lja3g2221 379 PANTHER OS08G0529300 PROTEIN 13 360 - -
Lja3g2221 379 SUPERFAMILY F-box domain 12 65 IPR036047 GO:0005515
Lja3g2221 379 Gene3D - 10 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2221 Lja-Chr3 26408208 26409690 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2221 - - cam:101504200 455.677