Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2214 ATGGTGTTGTCCATGGCCATTTCATCTCTACCTCACAACTCCACCTTTCTCCACCCACTCGCGCAGTTTCACTCTCCATCTCCATCTTCCTCTCAAACTCTCAGAAACCTCCCATTCAGACTCACAACCAGAATCCAAAGCGTTGGTGTTGGAAGAGAAGCTGCATCCTCACAACCAGGGTCAGGTCCTGATCCCAAGGCCGGTGTTTCCCTTTACAAACCCAAATCCTATGAAGTTCTCGTCACTGATGCTGCCAAGTCCCTCGCTCTTGCTCTTCAAGATGGAACACTTCGCCTCGAGATTGATTTCCCGCCTTTGCCCAGTAGCATATCTTCATATAAGGGGTCTTCAGATGATTTCATTGATGCCAACATTCAACTTGCCCTGGCTGTTGTAAGAAAGCTCCAGGAGAAAAAGGAAACCAGAGCTTGCATAGTATTCCCTGATAAGCCGGAAAAGCGCCGAGCCTCTGAGTTGTTCAAAGCAGCTATGGATTCGATAGATGGCATTACCATAGGTTCCTTAGATGATGTCCCAGGAGGACCAATGACTTCATTTTTCAGATCTGTTAGGAGCACCCTTGACTTTGACTTTGAAGATGAGAATGAAGGCCGTTGGCAGTCTAGTGAGCCTCCATCTCTCTATATATTCATTAATTGCAGTACACGAGAACTTGGTTATATAGAGAAGTATGTGGAAAAATTTGCTCCGTCAACACCAGCACTTCTATTCAATCTTGAACTAGATACATTGCGTGCGGATTTAGGCCTTCTAGGCTTCCCACCCAAAGATTTGCATTACCGCTTTCTTTCTCAATTCACTCCTGTGTTCTACATTCGGATAAGAGATTATTCAAAGACAGTTGCAATAGCGCCTTATATTGTCAACTACAGTGGAGCTGTGTTTCGTCAGTACCCTGGTCCTTGGCAGGTGATGCTTAAACAAGCAGATGGCTCTTTTGCTTGCATAGCAGAGAGTGCAACCCGCTTCACCCTTGGTGAAGCCAAAGAAGAATTGTTAAGAGTCCTGGGACTTCAAGAAGAAGAGGGAAGCTCTCTACAATTTCTTCGAAGAGGCTACAAGGCAAGCACGTGGTGGGAAGAGGATTCTGATTTGGAATTATCTTCTGCATGGCGGAATTGA 1143 0.4567 MVLSMAISSLPHNSTFLHPLAQFHSPSPSSSQTLRNLPFRLTTRIQSVGVGREAASSQPGSGPDPKAGVSLYKPKSYEVLVTDAAKSLALALQDGTLRLEIDFPPLPSSISSYKGSSDDFIDANIQLALAVVRKLQEKKETRACIVFPDKPEKRRASELFKAAMDSIDGITIGSLDDVPGGPMTSFFRSVRSTLDFDFEDENEGRWQSSEPPSLYIFINCSTRELGYIEKYVEKFAPSTPALLFNLELDTLRADLGLLGFPPKDLHYRFLSQFTPVFYIRIRDYSKTVAIAPYIVNYSGAVFRQYPGPWQVMLKQADGSFACIAESATRFTLGEAKEELLRVLGLQEEEGSSLQFLRRGYKASTWWEEDSDLELSSAWRN* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2214 380 Pfam Domain of unknown function (DUF1995) 74 336 IPR018962 -
Lja3g2214 380 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 21 380 - -
Lja3g2214 380 PANTHER PROTEIN LOW PSII ACCUMULATION 3, CHLOROPLASTIC 21 380 IPR044687 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2214 - - gmx:100803725 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2214 3 26326236 26330381 Lja3g2214 3 26326236 26330381 ECH