Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2209 ATGTCGGGCCCACCCAGAGTTCGATCCATGAACGTGGCCGTCGGCGACCATGAGGCGCGCCCGGTGCTGGTCCCGGCTTGCAACAAGGCTCGGCCTGCCGCCGTCGATGGGCGGAAGCCGGTGAAGAAATCGGTGCTGGAGACGGAGAAGGAGAAGAAGCCGGTGGCGCATCCGAACCCGCCGCAGCGTGTGTTGGTGTCGCCGGTGGTTTCGAGGCGGCAGGATCATCATCACCTTGCTGTGCTGAAGAACCTGTCGATGAGTGCTTCGTGCTCCTCGGATGCGTCGTCTACGGATTCTTCCACGCAGAGCAGTGGCGCGTCGTCGAGCGGGAAGGTGGCTCGGCGCGTGAGGAAGAAGCAGGCTGGTGCCAGGACGGAGAAGGTGAGCGCTGACAATGTGGCCGTGGCGGCTTCATCTGTTGACGCAGATTCAACTGATGGCTTAGAGAGCAAGAAAAGGTGTGCTTGGGTTACAGCGAATACAGAACCATGCTATATTGCTTTTCATGACGAAGAGTGGGGAGTTCCTGTTCATGATGACAAGAAACTATTTGAGTTGCTCAGCTTCTCTGGAGCCTTGGCTGAACTTACGTGGCCTACCATTCTTAGCAAAAGGCAGTTATTTCGGGAAGTCTTTTTGGATTTTGATCCAAATGTTGTTTCAAAAATGAATGAGAAGAAGATAGTTGCACCAGGGAACTCTGCCTGCACGTTGCTATCAGAGCTGAGGTTGCGATCAATAATTGAAAATGCACGTCAAATGTGTAAGGTAATTGAGGAGTTTGGGTCCTTTGACACATTTATTTGGAACTTTGTGAATAATAAGCCAATAGTCAGCCAGTTCCGGTACGCGCGCCAGGTGCCAGTCAAATCTCCGAAAGCAGAATTCATAAGTAAAGACCTTGTAAGGAGAGGATTCAGGAGCGTGGGACCAACAGTCATCTATACTTTTATGCAAGTAGCTGGTCTAACAAATGACCACCTTATCAGTTGCTTCAGATTCAAGGAGTGTACCTCCAATGCAGAAACAGTGAACAAAGAGAGCTCCCTCAACTCTAAGGTCAAAGAGAAGGCCAATGAGGAGGAGCCTAATGAGATGGGTCTGTTGCTAGCTGTGAACAAGTTGAACTTCACCTCTAAGTAG 1146 0.5096 MSGPPRVRSMNVAVGDHEARPVLVPACNKARPAAVDGRKPVKKSVLETEKEKKPVAHPNPPQRVLVSPVVSRRQDHHHLAVLKNLSMSASCSSDASSTDSSTQSSGASSSGKVARRVRKKQAGARTEKVSADNVAVAASSVDADSTDGLESKKRCAWVTANTEPCYIAFHDEEWGVPVHDDKKLFELLSFSGALAELTWPTILSKRQLFREVFLDFDPNVVSKMNEKKIVAPGNSACTLLSELRLRSIIENARQMCKVIEEFGSFDTFIWNFVNNKPIVSQFRYARQVPVKSPKAEFISKDLVRRGFRSVGPTVIYTFMQVAGLTNDHLISCFRFKECTSNAETVNKESSLNSKVKEKANEEEPNEMGLLLAVNKLNFTSK* 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2209 381 MobiDBLite consensus disorder prediction 90 133 - -
Lja3g2209 381 PANTHER OS04G0501200 PROTEIN 1 380 - -
Lja3g2209 381 Pfam Methyladenine glycosylase 160 334 IPR005019 GO:0006284|GO:0008725
Lja3g2209 381 MobiDBLite consensus disorder prediction 90 111 - -
Lja3g2209 381 Gene3D Hypothetical protein; domain 2 152 335 - -
Lja3g2209 381 SUPERFAMILY DNA-glycosylase 153 338 IPR011257 GO:0003824|GO:0006281
Lja3g2209 381 MobiDBLite consensus disorder prediction 31 63 - -
Lja3g2209 381 PANTHER DNA-3-METHYLADENINE GLYCOSYLASE I 1 380 - -
Lja3g2209 381 MobiDBLite consensus disorder prediction 35 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2209 Lja-Chr3 26262331 26267783 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2209 K01246 - gmx:100805836 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja3g2209 3 26262331 26267783 Lja3g2209 3 26262331 26267783 ECH