Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja3g2198 ATGACTTCCACTGAGAGAGATACACTGCTGCTGCAGAGGCTTAGACATGTGGGGAGGAAGCTGCTCAAATGCAAGCCTTATGATGATATTGATGTGGTTCTTGAACAGCTTGATAAATTGGAGCTGATTCTGTCAACGGTCGATCAAAGACCTGCCAATCATGTTCAAGAATCACTTGTGCCTTTAATGAAGGCACTAATTTCTGCTGAACTTTTGCGACATCCGGATGAGGATGTCAAGATCTCTGTTACATCTTGCCTAGCTGAGATCACAAGAATTACGGCACCAGATTCCCCTTATGATGATGAACAAATGAAGGAAGTTTTCAAGCTCAAGGTGTCAGCTTTTGAGAAATTGTGTCATGTATCTGGTCGTGGCTATGAAAAAGCATTAGCCATACTTGAGAATGTTTGGAAGGTCAGGTCATCCTTGGTCATGCTGGACCTTGAGTGTGATGACCTGGTTATTGAGATGTTTCATCATTTCTTTGGTGTTGTAAGGTCAAGCCATCCAAGTAATGTAATTCATTCAATGGAATCAATAATGACATTGGTCATAAACGAAAGTGATGAAATTTCCCCAGATCTTCTTAAACCTCTTTTAGATAGTGCTCGAAAGGAAAATCAGACTATCTCACCTATTTCTTGGACCTTGGCTGAGAAAGTAATAACCAGCTGTGCTGTGAAGCTTACACCGTTTCTTATGAAGGCCGTGGAGTCCTCAGGAAGATCTCTTCATGATTATCCACAAATCGTTTCGTCCATTTGCCAGAATCGATTGATTGCTTCTCCAAAGGCAGTGGTTCAGTCAGTTGATAACAAGCTTGATGTACCCACAGATGCAGATGATCAACCCTGTGATGTGACCAAAGGACTTGAACCAGATACTACTTGTGTGAGAGGTTCCCAACTTACGGGTGTTACAAAATCAAACATAAGTGCCAGTGCTGCTACTGTGGATGGAGAAGCTATAAAAAAGTCTGGTTCCAAAAGGAAACAACATTCTAATCTTACTAAGAACTCCAAAAGAAGCAGTGCAAACTCCAATTCAGAGACTTGCAATTTAGAGTCTGTTAAGGAACCAAGCTCTGAAACTCGGCTGAATACTTCGCCAAGGAGGAGGGACAATAAGCCTAATTCTTTGATGAATGCAGAGGAAGTCTATGATCACTCTTTGATTCATATGGGAACAAAAACCAGAAAATCAGCTCAATCCAGAAAGGCTCACAATACTAGCTCTGTTTCTTCACCTCCTAAAAATCCTATGTCCAGAAAGGATATGATGCAGCCGGAGCCTAAAACGAAACATGTAGCTCTAGTTTCTGAGCCGAGACATGAGAACATTGCAAAACCAGCTCAATTGAGAAAGACTTCTGCTATTGGAAGTGATTTTCTTCCTTCTGAAATCCCTGCTTCCAGCAAGGATAATGTACTGTCAAAGTCTGCAGATATGAGCGAAGGTGTTAAATCATTAGTAGCTAAACCTAAAAATGATGAGAACACTGATGCTTCTCTGCGTTTTACACATGATAAAGATGGAAGCCGCCCCAAAAGAGGTCGCCCTAGGAAAATAAGTAGCACAGGTAATCAAGATGTTCGTACTAGTTCTGTGTCAATATCAAAGAAAGGCAATTTGAATCCTCTGCTCGACAAGACTCTTCCCAAATCCCCTGATGTTGGGTTGGAAAAGGAATCTGATGAAAAACCTCAGCCACCCATTAGGAAAATTAAGTTTACTCTGAAGTCTAATGGGGGAACTTGTGTAGCTCCTGAATTGGTGGATGCTAATGTGGAACCTAAGGTTTCTTGTGAAGATGAGGGGAGAAACAAGTCAGCTATGAATGTTGAGGTGGAAAATAGAGAAGAGGCCAGATCTTCAGGTCAACCAGAGGTTAAGAAAAGGAGGAGGCATGATGATGCTACTCCTAACAAAGGTCTCAACAAATCATCTGCTGTGAAGGGGCCGATGGCGATTACTGAGTCTGCAAGTAAAGCATTAAGTGGAGTGGAGGAAACCACACAATCAAGGCTGAGGAGAAGGAACGTCACTACAAGCGTAGAGGTATCTGAATCTCGTGACCGTAGTAACTCATTGGTTGGTAGTCGGATCGAGGTCTGGTGGCCGAAGGACAAGACGTTTTATGCAGGTGTTGTCGCTTCTTATGATCCTGTCAGAGGAAAGCATAAGATTTTGTATGATGATGGGGATGAGGAAGTATTGAATCTTAACAAACAGCGCTGGAAACTAGTTGATGTTTCACCAAATGAGGAAAAAGGACTTGGACTTAAGGATCTCGCCGAGGCGTCGGATATGGTAGAAAAATGCAGAGAAACTCCCGAGTTGGAGTCAGCTAAGGGTGCAAAGACCAATTCTCAGTCCAGTAAAACTTCTACCAGCATCTTCAAATCTGAATCTGTAGAATCTGCCCTCAAATATATTTTTGGTGTTGACAGGAAAGATTCTGCCAGTAAGCCGCCTAAAACTTGA 2487 0.423 MTSTERDTLLLQRLRHVGRKLLKCKPYDDIDVVLEQLDKLELILSTVDQRPANHVQESLVPLMKALISAELLRHPDEDVKISVTSCLAEITRITAPDSPYDDEQMKEVFKLKVSAFEKLCHVSGRGYEKALAILENVWKVRSSLVMLDLECDDLVIEMFHHFFGVVRSSHPSNVIHSMESIMTLVINESDEISPDLLKPLLDSARKENQTISPISWTLAEKVITSCAVKLTPFLMKAVESSGRSLHDYPQIVSSICQNRLIASPKAVVQSVDNKLDVPTDADDQPCDVTKGLEPDTTCVRGSQLTGVTKSNISASAATVDGEAIKKSGSKRKQHSNLTKNSKRSSANSNSETCNLESVKEPSSETRLNTSPRRRDNKPNSLMNAEEVYDHSLIHMGTKTRKSAQSRKAHNTSSVSSPPKNPMSRKDMMQPEPKTKHVALVSEPRHENIAKPAQLRKTSAIGSDFLPSEIPASSKDNVLSKSADMSEGVKSLVAKPKNDENTDASLRFTHDKDGSRPKRGRPRKISSTGNQDVRTSSVSISKKGNLNPLLDKTLPKSPDVGLEKESDEKPQPPIRKIKFTLKSNGGTCVAPELVDANVEPKVSCEDEGRNKSAMNVEVENREEARSSGQPEVKKRRRHDDATPNKGLNKSSAVKGPMAITESASKALSGVEETTQSRLRRRNVTTSVEVSESRDRSNSLVGSRIEVWWPKDKTFYAGVVASYDPVRGKHKILYDDGDEEVLNLNKQRWKLVDVSPNEEKGLGLKDLAEASDMVEKCRETPELESAKGAKTNSQSSKTSTSIFKSESVESALKYIFGVDRKDSASKPPKT* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja3g2198 828 MobiDBLite consensus disorder prediction 599 684 - -
Lja3g2198 828 MobiDBLite consensus disorder prediction 491 574 - -
Lja3g2198 828 MobiDBLite consensus disorder prediction 492 519 - -
Lja3g2198 828 MobiDBLite consensus disorder prediction 406 422 - -
Lja3g2198 828 SUPERFAMILY ARM repeat 39 230 IPR016024 -
Lja3g2198 828 Pfam Sister chromatid cohesion protein PDS5 protein 34 234 - -
Lja3g2198 828 MobiDBLite consensus disorder prediction 771 802 - -
Lja3g2198 828 MobiDBLite consensus disorder prediction 523 545 - -
Lja3g2198 828 SUPERFAMILY Tudor/PWWP/MBT 696 738 - -
Lja3g2198 828 PANTHER TRANSCRIPTIONAL REGULATOR 8 799 - -
Lja3g2198 828 MobiDBLite consensus disorder prediction 556 574 - -
Lja3g2198 828 MobiDBLite consensus disorder prediction 599 643 - -
Lja3g2198 828 MobiDBLite consensus disorder prediction 397 433 - -
Lja3g2198 828 PANTHER ANDROGEN INDUCED INHIBITOR OF PROLIFERATION AS3 / PDS5-RELATED 8 799 IPR039776 GO:0007064
Lja3g2198 828 MobiDBLite consensus disorder prediction 339 365 - -
Lja3g2198 828 MobiDBLite consensus disorder prediction 784 802 - -
Lja3g2198 828 Gene3D - 690 744 - -
Lja3g2198 828 MobiDBLite consensus disorder prediction 325 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja3g2198 Lja-Chr3 26020715 26029745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja3g2198 - - aprc:113857095 805.823